Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm10254-201ENSMUST00000052888 867 ntBASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Ablim1-212ENSMUST00000111558 3123 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Gm44888-201ENSMUST00000209119 2541 ntBASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rnf220Q6PDX6 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Gm21115-201ENSMUST00000187565 2578 ntBASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Gm4984-201ENSMUST00000115987 360 ntBASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Gm7809-201ENSMUST00000153199 742 ntBASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Gm16379-201ENSMUST00000161469 348 ntBASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Gm8762-201ENSMUST00000193486 339 ntBASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Erich3-203ENSMUST00000189969 3460 ntBASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Klhl7-202ENSMUST00000163409 2857 ntTSL 2 BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 Gm37744-201ENSMUST00000194616 1590 ntBASIC10.86□□□□□ -0.67
Rnf220Q6PDX6 AC165148.1-201ENSMUST00000224795 2372 ntBASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 AC121574.1-201ENSMUST00000228770 3132 ntBASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Gm43221-201ENSMUST00000197612 2071 ntBASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Enox2-202ENSMUST00000114911 2623 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Gm14716-201ENSMUST00000120138 718 ntBASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Gm9136-201ENSMUST00000193368 454 ntBASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 Gm40466-201ENSMUST00000212174 422 ntBASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 AC159376.1-201ENSMUST00000218504 630 ntBASIC10.85□□□□□ -0.67
Rnf220Q6PDX6 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms