Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Gm20495-201ENSMUST00000173902 235 ntBASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Gm8343-201ENSMUST00000182705 994 ntBASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.67□□□□□ -0.38
Krt39Q6IFX4 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.67□□□□□ -0.38
Krt39Q6IFX4 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Gm36957-201ENSMUST00000192982 2824 ntBASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Krt39Q6IFX4 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Gm14130-201ENSMUST00000118417 987 ntBASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Krt39Q6IFX4 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Krt39Q6IFX4 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms