Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col11a2Q64739 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col11a2Q64739 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col11a2Q64739 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col11a2Q64739 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col11a2Q64739 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col11a2Q64739 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col11a2Q64739 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col11a2Q64739 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Col11a2Q64739 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col11a2Q64739 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Col11a2Q64739 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Col11a2Q64739 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC13.61□□□□□ -0.23
Col11a2Q64739 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC13.61□□□□□ -0.23
Col11a2Q64739 Gm20091-201ENSMUST00000179683 189 ntBASIC13.61□□□□□ -0.23
Col11a2Q64739 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Gm18862-201ENSMUST00000204643 933 ntBASIC13.61□□□□□ -0.23
Col11a2Q64739 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC13.61□□□□□ -0.23
Col11a2Q64739 AC241616.1-201ENSMUST00000213741 166 ntBASIC13.61□□□□□ -0.23
Col11a2Q64739 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC13.61□□□□□ -0.23
Col11a2Q64739 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.61□□□□□ -0.23
Col11a2Q64739 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.61□□□□□ -0.23
Col11a2Q64739 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Col11a2Q64739 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Col11a2Q64739 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Col11a2Q64739 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Gm44236-201ENSMUST00000204492 513 ntBASIC13.61□□□□□ -0.23
Col11a2Q64739 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Gm3791-201ENSMUST00000220790 768 ntBASIC13.61□□□□□ -0.23
Col11a2Q64739 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Gm7242-201ENSMUST00000221134 705 ntBASIC13.61□□□□□ -0.23
Col11a2Q64739 AC141884.2-201ENSMUST00000228811 775 ntBASIC13.61□□□□□ -0.23
Col11a2Q64739 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Gm4778-201ENSMUST00000098878 1098 ntBASIC13.61□□□□□ -0.23
Col11a2Q64739 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Col11a2Q64739 AC154197.1-201ENSMUST00000225136 1382 ntBASIC13.6□□□□□ -0.23
Col11a2Q64739 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Col11a2Q64739 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col11a2Q64739 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Col11a2Q64739 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Col11a2Q64739 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col11a2Q64739 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.6□□□□□ -0.23
Col11a2Q64739 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col11a2Q64739 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col11a2Q64739 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col11a2Q64739 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col11a2Q64739 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Col11a2Q64739 Mir598-201ENSMUST00000102094 79 ntBASIC13.6□□□□□ -0.23
Col11a2Q64739 Gm15373-201ENSMUST00000121495 214 ntBASIC13.6□□□□□ -0.23
Col11a2Q64739 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC13.6□□□□□ -0.23
Col11a2Q64739 Gm15258-201ENSMUST00000153801 741 ntBASIC13.6□□□□□ -0.23
Col11a2Q64739 Gm17107-201ENSMUST00000170983 553 ntBASIC13.6□□□□□ -0.23
Col11a2Q64739 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC13.6□□□□□ -0.23
Col11a2Q64739 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col11a2Q64739 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col11a2Q64739 Gm6304-201ENSMUST00000096579 447 ntBASIC13.6□□□□□ -0.23
Col11a2Q64739 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Col11a2Q64739 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Col11a2Q64739 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Col11a2Q64739 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col11a2Q64739 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col11a2Q64739 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Col11a2Q64739 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col11a2Q64739 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Col11a2Q64739 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col11a2Q64739 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC13.59□□□□□ -0.23
Col11a2Q64739 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.59□□□□□ -0.23
Col11a2Q64739 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col11a2Q64739 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Col11a2Q64739 Gm37058-201ENSMUST00000193393 1644 ntBASIC13.59□□□□□ -0.23
Col11a2Q64739 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Col11a2Q64739 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms