Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC10.56□□□□□ -0.72
AtmQ62388 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
AtmQ62388 Gm37723-201ENSMUST00000194480 565 ntBASIC10.56□□□□□ -0.72
AtmQ62388 Gm5738-201ENSMUST00000206016 779 ntBASIC10.56□□□□□ -0.72
AtmQ62388 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
AtmQ62388 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.56□□□□□ -0.72
AtmQ62388 AC241616.1-201ENSMUST00000213741 166 ntBASIC10.56□□□□□ -0.72
AtmQ62388 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC10.56□□□□□ -0.72
AtmQ62388 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC10.56□□□□□ -0.72
AtmQ62388 AC133496.1-201ENSMUST00000223891 743 ntBASIC10.56□□□□□ -0.72
AtmQ62388 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC10.56□□□□□ -0.72
AtmQ62388 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.56□□□□□ -0.72
AtmQ62388 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
AtmQ62388 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
AtmQ62388 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.56□□□□□ -0.72
AtmQ62388 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
AtmQ62388 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
AtmQ62388 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
AtmQ62388 Gm13688-201ENSMUST00000121557 608 ntBASIC10.56□□□□□ -0.72
AtmQ62388 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
AtmQ62388 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
AtmQ62388 Gm4753-201ENSMUST00000188327 1255 ntBASIC10.56□□□□□ -0.72
AtmQ62388 Gm44236-201ENSMUST00000204492 513 ntBASIC10.56□□□□□ -0.72
AtmQ62388 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC10.56□□□□□ -0.72
AtmQ62388 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.56□□□□□ -0.72
AtmQ62388 Gm5194-201ENSMUST00000221457 742 ntBASIC10.56□□□□□ -0.72
AtmQ62388 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
AtmQ62388 Gm8730-201ENSMUST00000076373 954 ntBASIC10.56□□□□□ -0.72
AtmQ62388 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
AtmQ62388 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
AtmQ62388 Gm22341-201ENSMUST00000083775 129 ntBASIC10.56□□□□□ -0.72
AtmQ62388 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
AtmQ62388 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
AtmQ62388 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
AtmQ62388 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
AtmQ62388 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
AtmQ62388 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
AtmQ62388 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Gm9619-201ENSMUST00000211587 762 ntBASIC10.55□□□□□ -0.72
AtmQ62388 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.55□□□□□ -0.72
AtmQ62388 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Gm37160-201ENSMUST00000193081 1689 ntBASIC10.55□□□□□ -0.72
AtmQ62388 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
AtmQ62388 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
AtmQ62388 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC10.55□□□□□ -0.72
AtmQ62388 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC10.55□□□□□ -0.72
AtmQ62388 Gm43851-201ENSMUST00000200726 327 ntTSL 3 BASIC10.55□□□□□ -0.72
AtmQ62388 Hpf1-201ENSMUST00000037190 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.55□□□□□ -0.72
AtmQ62388 Gm5159-201ENSMUST00000212733 1652 ntBASIC10.55□□□□□ -0.72
AtmQ62388 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Gm42499-201ENSMUST00000196193 1412 ntBASIC10.55□□□□□ -0.72
AtmQ62388 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
AtmQ62388 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
AtmQ62388 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
AtmQ62388 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
AtmQ62388 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.54□□□□□ -0.72
AtmQ62388 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
AtmQ62388 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
AtmQ62388 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
AtmQ62388 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
AtmQ62388 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC10.54□□□□□ -0.72
AtmQ62388 Gm8828-201ENSMUST00000196786 1290 ntBASIC10.54□□□□□ -0.72
AtmQ62388 Gm5191-201ENSMUST00000222882 1236 ntBASIC10.54□□□□□ -0.72
AtmQ62388 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
AtmQ62388 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
AtmQ62388 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
AtmQ62388 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.54□□□□□ -0.72
AtmQ62388 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
AtmQ62388 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
AtmQ62388 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
AtmQ62388 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.54□□□□□ -0.72
AtmQ62388 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.54□□□□□ -0.72
AtmQ62388 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
AtmQ62388 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
AtmQ62388 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
AtmQ62388 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
AtmQ62388 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
AtmQ62388 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms