Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Foxc1Q61572 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Foxc1Q61572 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC8.86□□□□□ -0.99
Foxc1Q61572 AC139754.2-201ENSMUST00000218037 1455 ntBASIC8.86□□□□□ -0.99
Foxc1Q61572 AC113441.2-201ENSMUST00000221538 1468 ntBASIC8.86□□□□□ -0.99
Foxc1Q61572 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Foxc1Q61572 Gm11411-201ENSMUST00000117951 719 ntBASIC8.86□□□□□ -0.99
Foxc1Q61572 Gm14130-201ENSMUST00000118417 987 ntBASIC8.86□□□□□ -0.99
Foxc1Q61572 Gm14975-201ENSMUST00000118741 664 ntBASIC8.86□□□□□ -0.99
Foxc1Q61572 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Gm12012-201ENSMUST00000118857 1066 ntBASIC8.86□□□□□ -0.99
Foxc1Q61572 Gm14017-201ENSMUST00000121934 386 ntBASIC8.86□□□□□ -0.99
Foxc1Q61572 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Foxc1Q61572 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Foxc1Q61572 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Foxc1Q61572 Gm3786-201ENSMUST00000202659 378 ntBASIC8.86□□□□□ -0.99
Foxc1Q61572 Gm43928-201ENSMUST00000203737 409 ntBASIC8.86□□□□□ -0.99
Foxc1Q61572 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Gm7443-201ENSMUST00000206355 378 ntBASIC8.86□□□□□ -0.99
Foxc1Q61572 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Gm18212-201ENSMUST00000211678 889 ntBASIC8.86□□□□□ -0.99
Foxc1Q61572 AC123835.1-201ENSMUST00000214362 670 ntBASIC8.86□□□□□ -0.99
Foxc1Q61572 AC159476.2-201ENSMUST00000216221 418 ntBASIC8.86□□□□□ -0.99
Foxc1Q61572 Gm39404-201ENSMUST00000216350 313 ntBASIC8.86□□□□□ -0.99
Foxc1Q61572 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Gm5655-201ENSMUST00000221078 901 ntBASIC8.86□□□□□ -0.99
Foxc1Q61572 Gm8607-201ENSMUST00000221864 431 ntBASIC8.86□□□□□ -0.99
Foxc1Q61572 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Foxc1Q61572 AC126253.1-202ENSMUST00000226732 835 ntBASIC8.86□□□□□ -0.99
Foxc1Q61572 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Foxc1Q61572 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Foxc1Q61572 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Foxc1Q61572 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Foxc1Q61572 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC8.86□□□□□ -0.99
Foxc1Q61572 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Foxc1Q61572 AC241621.2-201ENSMUST00000223991 2151 ntBASIC8.86□□□□□ -0.99
Foxc1Q61572 AC153506.1-201ENSMUST00000218768 2915 ntBASIC8.86□□□□□ -0.99
Foxc1Q61572 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Foxc1Q61572 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Foxc1Q61572 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Foxc1Q61572 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Foxc1Q61572 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Foxc1Q61572 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Foxc1Q61572 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC8.86□□□□□ -0.99
Foxc1Q61572 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Foxc1Q61572 Gm1995-201ENSMUST00000220838 2602 ntBASIC8.85□□□□□ -0.99
Foxc1Q61572 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Foxc1Q61572 AC131586.1-201ENSMUST00000228844 2964 ntBASIC8.85□□□□□ -0.99
Foxc1Q61572 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Foxc1Q61572 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Foxc1Q61572 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Foxc1Q61572 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Foxc1Q61572 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Foxc1Q61572 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Foxc1Q61572 Gm9333-201ENSMUST00000205452 1323 ntBASIC8.85□□□□□ -0.99
Foxc1Q61572 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Foxc1Q61572 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC8.85□□□□□ -0.99
Foxc1Q61572 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Foxc1Q61572 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Foxc1Q61572 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Foxc1Q61572 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Foxc1Q61572 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC8.85□□□□□ -0.99
Foxc1Q61572 Gm18227-201ENSMUST00000211082 1468 ntBASIC8.85□□□□□ -0.99
Foxc1Q61572 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Foxc1Q61572 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Foxc1Q61572 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Foxc1Q61572 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Foxc1Q61572 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Foxc1Q61572 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Foxc1Q61572 Gm25214-201ENSMUST00000104573 129 ntBASIC8.85□□□□□ -0.99
Foxc1Q61572 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
Foxc1Q61572 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Foxc1Q61572 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Foxc1Q61572 Gm11930-201ENSMUST00000117788 190 ntBASIC8.85□□□□□ -0.99
Foxc1Q61572 Gm25102-201ENSMUST00000122479 112 ntBASIC8.85□□□□□ -0.99
Foxc1Q61572 Gm14503-201ENSMUST00000130337 1164 ntBASIC8.85□□□□□ -0.99
Foxc1Q61572 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Foxc1Q61572 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Foxc1Q61572 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC8.85□□□□□ -0.99
Foxc1Q61572 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Foxc1Q61572 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC8.85□□□□□ -0.99
Foxc1Q61572 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC8.85□□□□□ -0.99
Foxc1Q61572 Gm8494-201ENSMUST00000178171 1233 ntBASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms