Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.68□□□□□ -0.38
Ift88Q61371 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ift88Q61371 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Ift88Q61371 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ift88Q61371 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.67□□□□□ -0.38
Ift88Q61371 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ift88Q61371 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ift88Q61371 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ift88Q61371 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ift88Q61371 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ift88Q61371 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ift88Q61371 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ift88Q61371 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ift88Q61371 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ift88Q61371 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.67□□□□□ -0.38
Ift88Q61371 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.67□□□□□ -0.38
Ift88Q61371 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ift88Q61371 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Ift88Q61371 Gm28686-201ENSMUST00000187404 609 ntBASIC12.67□□□□□ -0.38
Ift88Q61371 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.67□□□□□ -0.38
Ift88Q61371 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.67□□□□□ -0.38
Ift88Q61371 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.67□□□□□ -0.38
Ift88Q61371 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.67□□□□□ -0.38
Ift88Q61371 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.67□□□□□ -0.38
Ift88Q61371 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ift88Q61371 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ift88Q61371 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ift88Q61371 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.67□□□□□ -0.38
Ift88Q61371 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.67□□□□□ -0.38
Ift88Q61371 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.67□□□□□ -0.38
Ift88Q61371 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ift88Q61371 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ift88Q61371 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ift88Q61371 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ift88Q61371 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ift88Q61371 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.67□□□□□ -0.38
Ift88Q61371 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Ift88Q61371 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ift88Q61371 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ift88Q61371 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ift88Q61371 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ift88Q61371 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ift88Q61371 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ift88Q61371 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ift88Q61371 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ift88Q61371 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Ift88Q61371 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ift88Q61371 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift88Q61371 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift88Q61371 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ift88Q61371 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift88Q61371 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.66□□□□□ -0.38
Ift88Q61371 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift88Q61371 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.66□□□□□ -0.38
Ift88Q61371 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.66□□□□□ -0.38
Ift88Q61371 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ift88Q61371 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ift88Q61371 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ift88Q61371 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.66□□□□□ -0.38
Ift88Q61371 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.66□□□□□ -0.38
Ift88Q61371 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ift88Q61371 Gm24255-201ENSMUST00000104481 128 ntBASIC12.66□□□□□ -0.38
Ift88Q61371 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
Ift88Q61371 Gm11783-201ENSMUST00000119549 885 ntBASIC12.66□□□□□ -0.38
Ift88Q61371 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12.66□□□□□ -0.38
Ift88Q61371 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.66□□□□□ -0.38
Ift88Q61371 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift88Q61371 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Ift88Q61371 Gm29615-201ENSMUST00000185371 697 ntBASIC12.66□□□□□ -0.38
Ift88Q61371 Gm28224-201ENSMUST00000186078 697 ntBASIC12.66□□□□□ -0.38
Ift88Q61371 Gm29001-201ENSMUST00000186177 697 ntBASIC12.66□□□□□ -0.38
Ift88Q61371 Gm28292-201ENSMUST00000186593 697 ntBASIC12.66□□□□□ -0.38
Ift88Q61371 Gm28101-201ENSMUST00000187608 697 ntBASIC12.66□□□□□ -0.38
Ift88Q61371 Gm29076-201ENSMUST00000187689 697 ntBASIC12.66□□□□□ -0.38
Ift88Q61371 Gm28302-201ENSMUST00000187931 697 ntBASIC12.66□□□□□ -0.38
Ift88Q61371 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.66□□□□□ -0.38
Ift88Q61371 Gm28646-201ENSMUST00000188220 697 ntBASIC12.66□□□□□ -0.38
Ift88Q61371 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ift88Q61371 Gm28205-201ENSMUST00000189177 697 ntBASIC12.66□□□□□ -0.38
Ift88Q61371 Gm29032-201ENSMUST00000189797 697 ntBASIC12.66□□□□□ -0.38
Ift88Q61371 Gm28695-201ENSMUST00000190300 697 ntBASIC12.66□□□□□ -0.38
Ift88Q61371 Gm37448-201ENSMUST00000192795 697 ntBASIC12.66□□□□□ -0.38
Ift88Q61371 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.66□□□□□ -0.38
Ift88Q61371 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.66□□□□□ -0.38
Ift88Q61371 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.66□□□□□ -0.38
Ift88Q61371 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.66□□□□□ -0.38
Ift88Q61371 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.66□□□□□ -0.38
Ift88Q61371 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift88Q61371 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ift88Q61371 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift88Q61371 Gm26448-201ENSMUST00000082446 203 ntBASIC12.66□□□□□ -0.38
Ift88Q61371 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift88Q61371 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift88Q61371 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift88Q61371 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift88Q61371 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ift88Q61371 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ift88Q61371 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ift88Q61371 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift88Q61371 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms