Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.95□□□□□ -0.66
Nr1h4Q60641 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.95□□□□□ -0.66
Nr1h4Q60641 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Gm11930-201ENSMUST00000117788 190 ntBASIC10.95□□□□□ -0.66
Nr1h4Q60641 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.95□□□□□ -0.66
Nr1h4Q60641 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Gm6450-201ENSMUST00000200896 574 ntBASIC10.95□□□□□ -0.66
Nr1h4Q60641 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Gm5705-201ENSMUST00000066241 711 ntBASIC10.95□□□□□ -0.66
Nr1h4Q60641 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nr1h4Q60641 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.94□□□□□ -0.66
Nr1h4Q60641 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nr1h4Q60641 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.94□□□□□ -0.66
Nr1h4Q60641 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.94□□□□□ -0.66
Nr1h4Q60641 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Gm15370-201ENSMUST00000117158 253 ntBASIC10.94□□□□□ -0.66
Nr1h4Q60641 Gm14726-201ENSMUST00000120623 896 ntBASIC10.94□□□□□ -0.66
Nr1h4Q60641 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.94□□□□□ -0.66
Nr1h4Q60641 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.94□□□□□ -0.66
Nr1h4Q60641 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Gm31256-201ENSMUST00000194705 506 ntBASIC10.94□□□□□ -0.66
Nr1h4Q60641 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Rps4l-202ENSMUST00000204242 789 ntBASIC10.94□□□□□ -0.66
Nr1h4Q60641 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Olfr284-202ENSMUST00000206647 966 ntBASIC10.94□□□□□ -0.66
Nr1h4Q60641 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Nr1h4Q60641 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.94□□□□□ -0.66
Nr1h4Q60641 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.94□□□□□ -0.66
Nr1h4Q60641 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nr1h4Q60641 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Duxbl1-201ENSMUST00000049793 2266 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nr1h4Q60641 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms