Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Spire1Q52KF3 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spire1Q52KF3 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Spire1Q52KF3 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Spire1Q52KF3 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Spire1Q52KF3 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spire1Q52KF3 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.73□□□□□ -0.53
Spire1Q52KF3 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Spire1Q52KF3 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spire1Q52KF3 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spire1Q52KF3 Gm25148-201ENSMUST00000104611 123 ntBASIC11.73□□□□□ -0.53
Spire1Q52KF3 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spire1Q52KF3 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spire1Q52KF3 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.73□□□□□ -0.53
Spire1Q52KF3 Gm15197-201ENSMUST00000120526 478 ntBASIC11.73□□□□□ -0.53
Spire1Q52KF3 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spire1Q52KF3 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Spire1Q52KF3 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spire1Q52KF3 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spire1Q52KF3 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.73□□□□□ -0.53
Spire1Q52KF3 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.73□□□□□ -0.53
Spire1Q52KF3 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.73□□□□□ -0.53
Spire1Q52KF3 Gm18776-201ENSMUST00000188833 654 ntBASIC11.73□□□□□ -0.53
Spire1Q52KF3 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.73□□□□□ -0.53
Spire1Q52KF3 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.73□□□□□ -0.53
Spire1Q52KF3 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.73□□□□□ -0.53
Spire1Q52KF3 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.73□□□□□ -0.53
Spire1Q52KF3 Gm44056-201ENSMUST00000204623 1427 ntBASIC11.73□□□□□ -0.53
Spire1Q52KF3 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Spire1Q52KF3 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.73□□□□□ -0.53
Spire1Q52KF3 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.73□□□□□ -0.53
Spire1Q52KF3 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.73□□□□□ -0.53
Spire1Q52KF3 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.73□□□□□ -0.53
Spire1Q52KF3 Gm4604-201ENSMUST00000025040 390 ntBASIC11.73□□□□□ -0.53
Spire1Q52KF3 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spire1Q52KF3 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Spire1Q52KF3 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Spire1Q52KF3 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Spire1Q52KF3 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spire1Q52KF3 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Spire1Q52KF3 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.72□□□□□ -0.53
Spire1Q52KF3 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.72□□□□□ -0.53
Spire1Q52KF3 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.72□□□□□ -0.53
Spire1Q52KF3 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Gm12218-201ENSMUST00000117666 399 ntBASIC11.72□□□□□ -0.53
Spire1Q52KF3 Gm13549-201ENSMUST00000118339 796 ntBASIC11.72□□□□□ -0.53
Spire1Q52KF3 Gm12783-201ENSMUST00000121425 397 ntBASIC11.72□□□□□ -0.53
Spire1Q52KF3 Mir1905-201ENSMUST00000122779 82 ntBASIC11.72□□□□□ -0.53
Spire1Q52KF3 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Gm17889-201ENSMUST00000198410 598 ntBASIC11.72□□□□□ -0.53
Spire1Q52KF3 Gm35960-201ENSMUST00000202712 767 ntBASIC11.72□□□□□ -0.53
Spire1Q52KF3 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.72□□□□□ -0.53
Spire1Q52KF3 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.72□□□□□ -0.53
Spire1Q52KF3 Gm18463-201ENSMUST00000207258 474 ntBASIC11.72□□□□□ -0.53
Spire1Q52KF3 Gm18460-201ENSMUST00000208088 464 ntBASIC11.72□□□□□ -0.53
Spire1Q52KF3 Gm5599-201ENSMUST00000209602 788 ntBASIC11.72□□□□□ -0.53
Spire1Q52KF3 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.72□□□□□ -0.53
Spire1Q52KF3 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Spire1Q52KF3 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms