Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp48Q3V0C5 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Gm7150-201ENSMUST00000122032 981 ntBASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Gm37981-201ENSMUST00000194280 535 ntBASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Gm5870-201ENSMUST00000196461 282 ntBASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp48Q3V0C5 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Gm23272-201ENSMUST00000104053 129 ntBASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Gm44315-201ENSMUST00000203041 219 ntBASIC14.25□□□□□ -0.13
Usp48Q3V0C5 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Gm16380-201ENSMUST00000077997 478 ntBASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Usp48Q3V0C5 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Gm13019-201ENSMUST00000120000 276 ntBASIC14.24□□□□□ -0.13
Usp48Q3V0C5 Gm14247-201ENSMUST00000120950 237 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms