Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Znf48Q3US17 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Znf48Q3US17 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Znf48Q3US17 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Znf48Q3US17 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Selenot-ps-201ENSMUST00000119098 593 ntBASIC9.81□□□□□ -0.84
Znf48Q3US17 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC9.81□□□□□ -0.84
Znf48Q3US17 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC9.81□□□□□ -0.84
Znf48Q3US17 Gm18734-201ENSMUST00000172937 808 ntBASIC9.81□□□□□ -0.84
Znf48Q3US17 Gm5070-201ENSMUST00000177599 862 ntBASIC9.81□□□□□ -0.84
Znf48Q3US17 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Znf48Q3US17 Gm38092-201ENSMUST00000195600 653 ntBASIC9.81□□□□□ -0.84
Znf48Q3US17 Gm45219-201ENSMUST00000205602 465 ntBASIC9.81□□□□□ -0.84
Znf48Q3US17 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 AC125486.1-201ENSMUST00000218701 320 ntBASIC9.81□□□□□ -0.84
Znf48Q3US17 AC116589.9-201ENSMUST00000221462 908 ntBASIC9.81□□□□□ -0.84
Znf48Q3US17 AC116589.4-201ENSMUST00000222390 216 ntBASIC9.81□□□□□ -0.84
Znf48Q3US17 Zkscan3-207ENSMUST00000223831 2101 ntBASIC9.81□□□□□ -0.84
Znf48Q3US17 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Znf48Q3US17 Ntng1-201ENSMUST00000051253 327 ntBASIC9.81□□□□□ -0.84
Znf48Q3US17 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Znf48Q3US17 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Znf48Q3US17 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Znf48Q3US17 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Znf48Q3US17 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Znf48Q3US17 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Znf48Q3US17 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Gm6210-201ENSMUST00000204734 1942 ntBASIC9.8□□□□□ -0.84
Znf48Q3US17 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC9.8□□□□□ -0.84
Znf48Q3US17 Gm42840-201ENSMUST00000200303 2251 ntBASIC9.8□□□□□ -0.84
Znf48Q3US17 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Znf48Q3US17 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Znf48Q3US17 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC9.8□□□□□ -0.84
Znf48Q3US17 Gm11667-201ENSMUST00000119828 486 ntBASIC9.8□□□□□ -0.84
Znf48Q3US17 Gm15432-201ENSMUST00000121106 195 ntBASIC9.8□□□□□ -0.84
Znf48Q3US17 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC9.8□□□□□ -0.84
Znf48Q3US17 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC9.8□□□□□ -0.84
Znf48Q3US17 Gm13499-201ENSMUST00000142804 603 ntTSL 3 BASIC9.8□□□□□ -0.84
Znf48Q3US17 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC9.8□□□□□ -0.84
Znf48Q3US17 Gm23363-201ENSMUST00000175024 79 ntBASIC9.8□□□□□ -0.84
Znf48Q3US17 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Znf48Q3US17 Gm29664-201ENSMUST00000191125 463 ntBASIC9.8□□□□□ -0.84
Znf48Q3US17 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC9.8□□□□□ -0.84
Znf48Q3US17 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC9.8□□□□□ -0.84
Znf48Q3US17 Gm44551-201ENSMUST00000208804 171 ntBASIC9.8□□□□□ -0.84
Znf48Q3US17 Gm45401-201ENSMUST00000209456 733 ntBASIC9.8□□□□□ -0.84
Znf48Q3US17 Aprt-ps-201ENSMUST00000212311 505 ntBASIC9.8□□□□□ -0.84
Znf48Q3US17 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC9.8□□□□□ -0.84
Znf48Q3US17 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC9.8□□□□□ -0.84
Znf48Q3US17 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 AC166344.1-202ENSMUST00000224139 234 ntBASIC9.8□□□□□ -0.84
Znf48Q3US17 AC135469.1-201ENSMUST00000225984 772 ntBASIC9.8□□□□□ -0.84
Znf48Q3US17 AC158142.3-201ENSMUST00000226230 675 ntBASIC9.8□□□□□ -0.84
Znf48Q3US17 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Znf48Q3US17 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Znf48Q3US17 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC9.8□□□□□ -0.84
Znf48Q3US17 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Znf48Q3US17 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.8□□□□□ -0.84
Znf48Q3US17 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms