Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 AC122408.1-201ENSMUST00000218949 218 ntBASIC13.53□□□□□ -0.24
Limch1Q3UH68 CT009738.1-201ENSMUST00000219031 809 ntBASIC13.53□□□□□ -0.24
Limch1Q3UH68 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.53□□□□□ -0.24
Limch1Q3UH68 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limch1Q3UH68 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.53□□□□□ -0.24
Limch1Q3UH68 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Limch1Q3UH68 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Limch1Q3UH68 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Limch1Q3UH68 Gm38055-201ENSMUST00000195353 2217 ntBASIC13.52□□□□□ -0.24
Limch1Q3UH68 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Limch1Q3UH68 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Limch1Q3UH68 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Limch1Q3UH68 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Limch1Q3UH68 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Limch1Q3UH68 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Limch1Q3UH68 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.52□□□□□ -0.25
Limch1Q3UH68 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.52□□□□□ -0.25
Limch1Q3UH68 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Limch1Q3UH68 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Gm7600-201ENSMUST00000209657 785 ntBASIC13.52□□□□□ -0.25
Limch1Q3UH68 Gm9132-201ENSMUST00000210182 832 ntBASIC13.52□□□□□ -0.25
Limch1Q3UH68 Gm45398-201ENSMUST00000210561 165 ntBASIC13.52□□□□□ -0.25
Limch1Q3UH68 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Limch1Q3UH68 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.52□□□□□ -0.25
Limch1Q3UH68 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.52□□□□□ -0.25
Limch1Q3UH68 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Limch1Q3UH68 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Limch1Q3UH68 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.52□□□□□ -0.25
Limch1Q3UH68 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.52□□□□□ -0.25
Limch1Q3UH68 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Limch1Q3UH68 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limch1Q3UH68 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limch1Q3UH68 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.51□□□□□ -0.25
Limch1Q3UH68 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limch1Q3UH68 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limch1Q3UH68 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Limch1Q3UH68 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Limch1Q3UH68 Gm15573-201ENSMUST00000119487 540 ntBASIC13.51□□□□□ -0.25
Limch1Q3UH68 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.51□□□□□ -0.25
Limch1Q3UH68 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Limch1Q3UH68 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.51□□□□□ -0.25
Limch1Q3UH68 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.51□□□□□ -0.25
Limch1Q3UH68 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Limch1Q3UH68 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limch1Q3UH68 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.51□□□□□ -0.25
Limch1Q3UH68 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.51□□□□□ -0.25
Limch1Q3UH68 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limch1Q3UH68 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limch1Q3UH68 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limch1Q3UH68 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Limch1Q3UH68 Gm37969-201ENSMUST00000195777 3409 ntBASIC13.51□□□□□ -0.25
Limch1Q3UH68 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Limch1Q3UH68 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limch1Q3UH68 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limch1Q3UH68 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limch1Q3UH68 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Limch1Q3UH68 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limch1Q3UH68 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limch1Q3UH68 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limch1Q3UH68 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC13.51□□□□□ -0.25
Limch1Q3UH68 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limch1Q3UH68 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Limch1Q3UH68 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Limch1Q3UH68 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Limch1Q3UH68 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms