Protein–RNA interactions for Protein: Q3UEB3

Puf60, Poly(U)-binding-splicing factor PUF60, mousemouse

Known RBP Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Puf60Q3UEB3 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Gm14234-201ENSMUST00000119539 845 ntBASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Gm11979-201ENSMUST00000119629 743 ntBASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Gm14993-201ENSMUST00000121180 164 ntBASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Gm12453-201ENSMUST00000121981 331 ntBASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Puf60Q3UEB3 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Gm34379-201ENSMUST00000195036 290 ntBASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Gm43002-201ENSMUST00000200310 155 ntBASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Gm43249-201ENSMUST00000200464 458 ntBASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Gm37014-201ENSMUST00000194723 2253 ntBASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Puf60Q3UEB3 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Gm7104-201ENSMUST00000179741 2532 ntBASIC15.68■□□□□ 0.1
Puf60Q3UEB3 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Gm6158-201ENSMUST00000109467 904 ntBASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Gm14398-201ENSMUST00000117287 1073 ntBASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Gm15036-201ENSMUST00000118880 400 ntBASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Gm24328-201ENSMUST00000175104 67 ntBASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Mir6923-201ENSMUST00000184592 72 ntBASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Gm43778-201ENSMUST00000199438 199 ntBASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 AC140375.1-201ENSMUST00000225421 694 ntBASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Puf60Q3UEB3 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Gm22846-201ENSMUST00000157706 270 ntBASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Gm42867-201ENSMUST00000202995 469 ntBASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Gm18035-201ENSMUST00000211962 589 ntBASIC15.67■□□□□ 0.1
Puf60Q3UEB3 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 CT030166.5-201ENSMUST00000222249 420 ntBASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Puf60Q3UEB3 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC15.67■□□□□ 0.1
Puf60Q3UEB3 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms