Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Gm22614-201ENSMUST00000178300 165 ntBASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Gm5982-201ENSMUST00000196234 512 ntBASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Gm6450-201ENSMUST00000200896 574 ntBASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.18□□□□□ -0.46
Trim43aQ3TL54 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.18□□□□□ -0.46
Trim43aQ3TL54 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Gm22042-201ENSMUST00000082989 165 ntBASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Gm26110-201ENSMUST00000083971 165 ntBASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim43aQ3TL54 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Gm26286-201ENSMUST00000104166 134 ntBASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Gm6963-201ENSMUST00000147879 379 ntBASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Gm5070-201ENSMUST00000177599 862 ntBASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Gm27046-201ENSMUST00000182160 463 ntBASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.17□□□□□ -0.46
Trim43aQ3TL54 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Gm2553-201ENSMUST00000215986 605 ntBASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim43aQ3TL54 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Gm14071-201ENSMUST00000117817 509 ntBASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Gm14109-201ENSMUST00000118814 309 ntBASIC12.16□□□□□ -0.46
Trim43aQ3TL54 Gm13665-201ENSMUST00000120830 528 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms