Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Hoxc4Q08624 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.03□□□□□ -0.64
Hoxc4Q08624 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.03□□□□□ -0.64
Hoxc4Q08624 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.03□□□□□ -0.64
Hoxc4Q08624 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.03□□□□□ -0.64
Hoxc4Q08624 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.03□□□□□ -0.64
Hoxc4Q08624 Gm12791-201ENSMUST00000120788 655 ntBASIC11.03□□□□□ -0.64
Hoxc4Q08624 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Gm5298-201ENSMUST00000201122 892 ntBASIC11.03□□□□□ -0.64
Hoxc4Q08624 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.03□□□□□ -0.64
Hoxc4Q08624 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.03□□□□□ -0.64
Hoxc4Q08624 Gm9139-201ENSMUST00000218817 700 ntBASIC11.03□□□□□ -0.64
Hoxc4Q08624 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.03□□□□□ -0.64
Hoxc4Q08624 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.03□□□□□ -0.64
Hoxc4Q08624 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hoxc4Q08624 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hoxc4Q08624 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.02□□□□□ -0.64
Hoxc4Q08624 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Hoxc4Q08624 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hoxc4Q08624 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hoxc4Q08624 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hoxc4Q08624 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Hoxc4Q08624 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Hoxc4Q08624 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hoxc4Q08624 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hoxc4Q08624 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hoxc4Q08624 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Hoxc4Q08624 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Hoxc4Q08624 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxc4Q08624 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.02□□□□□ -0.65
Hoxc4Q08624 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Hoxc4Q08624 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.02□□□□□ -0.65
Hoxc4Q08624 Gm9673-201ENSMUST00000119287 781 ntBASIC11.02□□□□□ -0.65
Hoxc4Q08624 Gm15782-201ENSMUST00000121073 445 ntBASIC11.02□□□□□ -0.65
Hoxc4Q08624 Gm4917-201ENSMUST00000121452 650 ntBASIC11.02□□□□□ -0.65
Hoxc4Q08624 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.02□□□□□ -0.65
Hoxc4Q08624 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Hoxc4Q08624 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.02□□□□□ -0.65
Hoxc4Q08624 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.02□□□□□ -0.65
Hoxc4Q08624 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.02□□□□□ -0.65
Hoxc4Q08624 Gm9353-201ENSMUST00000200472 604 ntBASIC11.02□□□□□ -0.65
Hoxc4Q08624 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.02□□□□□ -0.65
Hoxc4Q08624 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.02□□□□□ -0.65
Hoxc4Q08624 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.02□□□□□ -0.65
Hoxc4Q08624 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.02□□□□□ -0.65
Hoxc4Q08624 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxc4Q08624 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms