Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Gm12266-201ENSMUST00000120311 962 ntBASIC11.56□□□□□ -0.56
Pfdn6Q03958 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Gm23085-201ENSMUST00000157849 293 ntBASIC11.56□□□□□ -0.56
Pfdn6Q03958 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.56□□□□□ -0.56
Pfdn6Q03958 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.56□□□□□ -0.56
Pfdn6Q03958 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.56□□□□□ -0.56
Pfdn6Q03958 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Gm10288-201ENSMUST00000084614 537 ntBASIC11.56□□□□□ -0.56
Pfdn6Q03958 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.56□□□□□ -0.56
Pfdn6Q03958 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.56□□□□□ -0.56
Pfdn6Q03958 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.56□□□□□ -0.56
Pfdn6Q03958 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Pfdn6Q03958 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pfdn6Q03958 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Gm24891-201ENSMUST00000104391 136 ntBASIC11.55□□□□□ -0.56
Pfdn6Q03958 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Gm8566-201ENSMUST00000120174 465 ntBASIC11.55□□□□□ -0.56
Pfdn6Q03958 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Gm25881-201ENSMUST00000157783 103 ntBASIC11.55□□□□□ -0.56
Pfdn6Q03958 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.55□□□□□ -0.56
Pfdn6Q03958 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pfdn6Q03958 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Gm8100-201ENSMUST00000182906 988 ntBASIC11.55□□□□□ -0.56
Pfdn6Q03958 Gm6108-201ENSMUST00000208365 367 ntBASIC11.55□□□□□ -0.56
Pfdn6Q03958 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Pfdn6Q03958 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.55□□□□□ -0.56
Pfdn6Q03958 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pfdn6Q03958 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.54□□□□□ -0.56
Pfdn6Q03958 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Btrc-209ENSMUST00000224478 2194 ntBASIC11.54□□□□□ -0.56
Pfdn6Q03958 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pfdn6Q03958 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms