Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
GabpaQ00422 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.01□□□□□ -0.33
GabpaQ00422 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
GabpaQ00422 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
GabpaQ00422 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GabpaQ00422 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC13.01□□□□□ -0.33
GabpaQ00422 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC13.01□□□□□ -0.33
GabpaQ00422 Gm37638-201ENSMUST00000194337 1123 ntBASIC13.01□□□□□ -0.33
GabpaQ00422 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GabpaQ00422 Gm18059-201ENSMUST00000208073 580 ntBASIC13.01□□□□□ -0.33
GabpaQ00422 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC13.01□□□□□ -0.33
GabpaQ00422 Gm18968-201ENSMUST00000221319 862 ntBASIC13.01□□□□□ -0.33
GabpaQ00422 AC164618.2-201ENSMUST00000224770 573 ntBASIC13.01□□□□□ -0.33
GabpaQ00422 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GabpaQ00422 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GabpaQ00422 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
GabpaQ00422 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
GabpaQ00422 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GabpaQ00422 Gm5171-201ENSMUST00000214944 1415 ntBASIC13.01□□□□□ -0.33
GabpaQ00422 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC13.01□□□□□ -0.33
GabpaQ00422 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GabpaQ00422 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
GabpaQ00422 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC13.01□□□□□ -0.33
GabpaQ00422 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
GabpaQ00422 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
GabpaQ00422 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
GabpaQ00422 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
GabpaQ00422 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
GabpaQ00422 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
GabpaQ00422 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
GabpaQ00422 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GabpaQ00422 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13□□□□□ -0.33
GabpaQ00422 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
GabpaQ00422 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13□□□□□ -0.33
GabpaQ00422 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13□□□□□ -0.33
GabpaQ00422 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GabpaQ00422 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13□□□□□ -0.33
GabpaQ00422 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13□□□□□ -0.33
GabpaQ00422 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GabpaQ00422 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GabpaQ00422 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13□□□□□ -0.33
GabpaQ00422 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13□□□□□ -0.33
GabpaQ00422 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
GabpaQ00422 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
GabpaQ00422 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
GabpaQ00422 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GabpaQ00422 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
GabpaQ00422 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC13□□□□□ -0.33
GabpaQ00422 Gm12194-201ENSMUST00000117756 1012 ntBASIC13□□□□□ -0.33
GabpaQ00422 Gm6322-201ENSMUST00000118789 1004 ntBASIC13□□□□□ -0.33
GabpaQ00422 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GabpaQ00422 Gm3329-201ENSMUST00000159873 556 ntBASIC13□□□□□ -0.33
GabpaQ00422 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC13□□□□□ -0.33
GabpaQ00422 Gm22877-201ENSMUST00000175451 105 ntBASIC13□□□□□ -0.33
GabpaQ00422 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC13□□□□□ -0.33
GabpaQ00422 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13□□□□□ -0.33
GabpaQ00422 Gm44323-201ENSMUST00000198689 129 ntBASIC13□□□□□ -0.33
GabpaQ00422 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
GabpaQ00422 Mt1-202ENSMUST00000211807 1085 ntBASIC13□□□□□ -0.33
GabpaQ00422 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13□□□□□ -0.33
GabpaQ00422 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC13□□□□□ -0.33
GabpaQ00422 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC13□□□□□ -0.33
GabpaQ00422 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13□□□□□ -0.33
GabpaQ00422 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13□□□□□ -0.33
GabpaQ00422 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13□□□□□ -0.33
GabpaQ00422 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GabpaQ00422 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
GabpaQ00422 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
GabpaQ00422 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13□□□□□ -0.33
GabpaQ00422 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13□□□□□ -0.33
GabpaQ00422 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GabpaQ00422 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
GabpaQ00422 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.99□□□□□ -0.33
GabpaQ00422 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
GabpaQ00422 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
GabpaQ00422 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.99□□□□□ -0.33
GabpaQ00422 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
GabpaQ00422 Gm11340-201ENSMUST00000119226 412 ntBASIC12.99□□□□□ -0.33
GabpaQ00422 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.99□□□□□ -0.33
GabpaQ00422 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.99□□□□□ -0.33
GabpaQ00422 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GabpaQ00422 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC12.99□□□□□ -0.33
GabpaQ00422 Gm24248-201ENSMUST00000157321 322 ntBASIC12.99□□□□□ -0.33
GabpaQ00422 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms