Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.65□□□□□ -0.7
Cacna1aP97445 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Cacna1aP97445 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Cacna1aP97445 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Cacna1aP97445 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Cacna1aP97445 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.71
Cacna1aP97445 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cacna1aP97445 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.65□□□□□ -0.71
Cacna1aP97445 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cacna1aP97445 Gm23769-201ENSMUST00000104441 121 ntBASIC10.65□□□□□ -0.71
Cacna1aP97445 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.65□□□□□ -0.71
Cacna1aP97445 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC10.65□□□□□ -0.71
Cacna1aP97445 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Cacna1aP97445 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC10.65□□□□□ -0.71
Cacna1aP97445 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC10.65□□□□□ -0.71
Cacna1aP97445 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC10.65□□□□□ -0.71
Cacna1aP97445 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cacna1aP97445 Rps3a2-201ENSMUST00000074245 792 ntBASIC10.65□□□□□ -0.71
Cacna1aP97445 Rps3a3-201ENSMUST00000074680 795 ntBASIC10.65□□□□□ -0.71
Cacna1aP97445 Gm5449-201ENSMUST00000081132 357 ntBASIC10.65□□□□□ -0.71
Cacna1aP97445 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cacna1aP97445 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
Cacna1aP97445 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Cacna1aP97445 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Cacna1aP97445 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.64□□□□□ -0.71
Cacna1aP97445 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.64□□□□□ -0.71
Cacna1aP97445 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.64□□□□□ -0.71
Cacna1aP97445 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.64□□□□□ -0.71
Cacna1aP97445 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Cacna1aP97445 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC10.64□□□□□ -0.71
Cacna1aP97445 Gm15982-201ENSMUST00000121681 554 ntBASIC10.64□□□□□ -0.71
Cacna1aP97445 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 Gm25492-201ENSMUST00000157383 129 ntBASIC10.64□□□□□ -0.71
Cacna1aP97445 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.64□□□□□ -0.71
Cacna1aP97445 Gm7627-201ENSMUST00000183205 999 ntBASIC10.64□□□□□ -0.71
Cacna1aP97445 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC10.64□□□□□ -0.71
Cacna1aP97445 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC10.64□□□□□ -0.71
Cacna1aP97445 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.64□□□□□ -0.71
Cacna1aP97445 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Cacna1aP97445 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC10.64□□□□□ -0.71
Cacna1aP97445 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Cacna1aP97445 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.64□□□□□ -0.71
Cacna1aP97445 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Cacna1aP97445 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Cacna1aP97445 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Cacna1aP97445 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 Gm11957-201ENSMUST00000118304 779 ntBASIC10.63□□□□□ -0.71
Cacna1aP97445 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.63□□□□□ -0.71
Cacna1aP97445 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 Gm4895-201ENSMUST00000181646 1137 ntBASIC10.63□□□□□ -0.71
Cacna1aP97445 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC10.63□□□□□ -0.71
Cacna1aP97445 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC10.63□□□□□ -0.71
Cacna1aP97445 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Cacna1aP97445 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.63□□□□□ -0.71
Cacna1aP97445 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Cacna1aP97445 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Cacna1aP97445 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms