Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.63□□□□□ -0.39
Lig3P97386 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Lig3P97386 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Lig3P97386 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.63□□□□□ -0.39
Lig3P97386 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Lig3P97386 Gm24231-201ENSMUST00000104315 133 ntBASIC12.63□□□□□ -0.39
Lig3P97386 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 Gm1848-201ENSMUST00000120711 789 ntBASIC12.63□□□□□ -0.39
Lig3P97386 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Lig3P97386 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Lig3P97386 Gm22877-201ENSMUST00000175451 105 ntBASIC12.63□□□□□ -0.39
Lig3P97386 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
Lig3P97386 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.63□□□□□ -0.39
Lig3P97386 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.63□□□□□ -0.39
Lig3P97386 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.63□□□□□ -0.39
Lig3P97386 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 Gm5455-201ENSMUST00000058710 715 ntBASIC12.63□□□□□ -0.39
Lig3P97386 Gm8325-201ENSMUST00000099086 453 ntBASIC12.63□□□□□ -0.39
Lig3P97386 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Lig3P97386 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lig3P97386 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.62□□□□□ -0.39
Lig3P97386 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.62□□□□□ -0.39
Lig3P97386 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Gm11956-201ENSMUST00000119525 512 ntBASIC12.62□□□□□ -0.39
Lig3P97386 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.62□□□□□ -0.39
Lig3P97386 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.62□□□□□ -0.39
Lig3P97386 Gm25545-201ENSMUST00000122673 323 ntBASIC12.62□□□□□ -0.39
Lig3P97386 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.62□□□□□ -0.39
Lig3P97386 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.62□□□□□ -0.39
Lig3P97386 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Lig3P97386 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.62□□□□□ -0.39
Lig3P97386 Gm7902-201ENSMUST00000198842 947 ntBASIC12.62□□□□□ -0.39
Lig3P97386 Gm5298-201ENSMUST00000201122 892 ntBASIC12.62□□□□□ -0.39
Lig3P97386 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.62□□□□□ -0.39
Lig3P97386 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.62□□□□□ -0.39
Lig3P97386 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
Lig3P97386 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lig3P97386 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Lig3P97386 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lig3P97386 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lig3P97386 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Lig3P97386 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Lig3P97386 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lig3P97386 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms