Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.31□□□□□ -0.76
SgcbP82349 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.31□□□□□ -0.76
SgcbP82349 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
SgcbP82349 Gm44683-201ENSMUST00000209088 484 ntBASIC10.31□□□□□ -0.76
SgcbP82349 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.31□□□□□ -0.76
SgcbP82349 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.31□□□□□ -0.76
SgcbP82349 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.31□□□□□ -0.76
SgcbP82349 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC10.31□□□□□ -0.76
SgcbP82349 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.31□□□□□ -0.76
SgcbP82349 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.31□□□□□ -0.76
SgcbP82349 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.31□□□□□ -0.76
SgcbP82349 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
SgcbP82349 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
SgcbP82349 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
SgcbP82349 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.31□□□□□ -0.76
SgcbP82349 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
SgcbP82349 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
SgcbP82349 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.3□□□□□ -0.76
SgcbP82349 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.3□□□□□ -0.76
SgcbP82349 Gm22920-201ENSMUST00000102175 109 ntBASIC10.3□□□□□ -0.76
SgcbP82349 Gm11956-201ENSMUST00000119525 512 ntBASIC10.3□□□□□ -0.76
SgcbP82349 Gm15595-201ENSMUST00000120840 961 ntBASIC10.3□□□□□ -0.76
SgcbP82349 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC10.3□□□□□ -0.76
SgcbP82349 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 Gm22902-201ENSMUST00000158488 302 ntBASIC10.3□□□□□ -0.76
SgcbP82349 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC10.3□□□□□ -0.76
SgcbP82349 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.3□□□□□ -0.76
SgcbP82349 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.3□□□□□ -0.76
SgcbP82349 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.3□□□□□ -0.76
SgcbP82349 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
SgcbP82349 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.3□□□□□ -0.76
SgcbP82349 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
SgcbP82349 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.3□□□□□ -0.76
SgcbP82349 Gm18065-201ENSMUST00000221395 526 ntBASIC10.3□□□□□ -0.76
SgcbP82349 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
SgcbP82349 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
SgcbP82349 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.3□□□□□ -0.76
SgcbP82349 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
SgcbP82349 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
SgcbP82349 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
SgcbP82349 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
SgcbP82349 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
SgcbP82349 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SgcbP82349 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
SgcbP82349 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.29□□□□□ -0.76
SgcbP82349 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.29□□□□□ -0.76
SgcbP82349 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SgcbP82349 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms