Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Smad1P70340 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.85□□□□□ -0.51
Smad1P70340 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smad1P70340 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smad1P70340 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smad1P70340 Gm5455-201ENSMUST00000058710 715 ntBASIC11.85□□□□□ -0.51
Smad1P70340 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smad1P70340 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smad1P70340 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smad1P70340 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Smad1P70340 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smad1P70340 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smad1P70340 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smad1P70340 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smad1P70340 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smad1P70340 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smad1P70340 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smad1P70340 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smad1P70340 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smad1P70340 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smad1P70340 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Smad1P70340 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
Smad1P70340 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.84□□□□□ -0.51
Smad1P70340 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.84□□□□□ -0.51
Smad1P70340 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.84□□□□□ -0.51
Smad1P70340 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
Smad1P70340 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.84□□□□□ -0.51
Smad1P70340 Gm23251-201ENSMUST00000103773 110 ntBASIC11.84□□□□□ -0.51
Smad1P70340 Gm14460-201ENSMUST00000121511 639 ntBASIC11.84□□□□□ -0.51
Smad1P70340 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Smad1P70340 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.84□□□□□ -0.51
Smad1P70340 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.84□□□□□ -0.51
Smad1P70340 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Smad1P70340 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Smad1P70340 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.84□□□□□ -0.51
Smad1P70340 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Smad1P70340 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Smad1P70340 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.84□□□□□ -0.51
Smad1P70340 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Smad1P70340 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smad1P70340 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Smad1P70340 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smad1P70340 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Smad1P70340 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smad1P70340 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smad1P70340 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smad1P70340 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.83□□□□□ -0.52
Smad1P70340 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.83□□□□□ -0.52
Smad1P70340 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smad1P70340 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smad1P70340 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smad1P70340 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Smad1P70340 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smad1P70340 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smad1P70340 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smad1P70340 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.83□□□□□ -0.52
Smad1P70340 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.83□□□□□ -0.52
Smad1P70340 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.83□□□□□ -0.52
Smad1P70340 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.83□□□□□ -0.52
Smad1P70340 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Smad1P70340 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smad1P70340 Gm18038-201ENSMUST00000197900 485 ntBASIC11.83□□□□□ -0.52
Smad1P70340 Gm43962-201ENSMUST00000203898 190 ntBASIC11.83□□□□□ -0.52
Smad1P70340 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Smad1P70340 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smad1P70340 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.83□□□□□ -0.52
Smad1P70340 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smad1P70340 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smad1P70340 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smad1P70340 Gm21811-201ENSMUST00000096485 930 ntBASIC11.83□□□□□ -0.52
Smad1P70340 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smad1P70340 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smad1P70340 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smad1P70340 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smad1P70340 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smad1P70340 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms