Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cux2P70298 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cux2P70298 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cux2P70298 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Cux2P70298 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cux2P70298 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cux2P70298 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cux2P70298 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cux2P70298 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cux2P70298 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cux2P70298 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cux2P70298 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cux2P70298 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cux2P70298 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC18.46■□□□□ 0.55
Cux2P70298 Gm19027-201ENSMUST00000187291 1355 ntBASIC18.46■□□□□ 0.55
Cux2P70298 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Cux2P70298 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cux2P70298 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cux2P70298 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cux2P70298 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC18.46■□□□□ 0.55
Cux2P70298 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cux2P70298 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC18.46■□□□□ 0.55
Cux2P70298 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC18.46■□□□□ 0.55
Cux2P70298 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cux2P70298 Mir3091-201ENSMUST00000175086 76 ntBASIC18.46■□□□□ 0.55
Cux2P70298 Gm42859-201ENSMUST00000199572 193 ntBASIC18.46■□□□□ 0.55
Cux2P70298 Gm45484-201ENSMUST00000210310 1141 ntBASIC18.46■□□□□ 0.55
Cux2P70298 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Cux2P70298 Rps18-201ENSMUST00000008812 600 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cux2P70298 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cux2P70298 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cux2P70298 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Cux2P70298 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cux2P70298 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cux2P70298 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Cux2P70298 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Cux2P70298 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC18.45■□□□□ 0.54
Cux2P70298 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cux2P70298 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC18.45■□□□□ 0.54
Cux2P70298 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Cux2P70298 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cux2P70298 Gm29101-201ENSMUST00000188329 1471 ntBASIC18.45■□□□□ 0.54
Cux2P70298 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cux2P70298 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cux2P70298 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cux2P70298 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cux2P70298 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cux2P70298 Gm5873-201ENSMUST00000177157 1066 ntBASIC18.45■□□□□ 0.54
Cux2P70298 Gm5311-201ENSMUST00000203518 709 ntBASIC18.45■□□□□ 0.54
Cux2P70298 Gm44236-201ENSMUST00000204492 513 ntBASIC18.45■□□□□ 0.54
Cux2P70298 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cux2P70298 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
Cux2P70298 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cux2P70298 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cux2P70298 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cux2P70298 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cux2P70298 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC18.45■□□□□ 0.54
Cux2P70298 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cux2P70298 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cux2P70298 Gm37861-201ENSMUST00000193534 2869 ntBASIC18.45■□□□□ 0.54
Cux2P70298 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cux2P70298 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cux2P70298 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cux2P70298 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cux2P70298 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cux2P70298 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cux2P70298 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cux2P70298 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cux2P70298 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cux2P70298 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cux2P70298 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cux2P70298 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC18.44■□□□□ 0.54
Cux2P70298 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cux2P70298 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Cux2P70298 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cux2P70298 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC18.44■□□□□ 0.54
Cux2P70298 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cux2P70298 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC18.44■□□□□ 0.54
Cux2P70298 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC18.44■□□□□ 0.54
Cux2P70298 Gm44304-201ENSMUST00000200509 145 ntBASIC18.44■□□□□ 0.54
Cux2P70298 Gm6859-201ENSMUST00000218614 989 ntBASIC18.44■□□□□ 0.54
Cux2P70298 CT025618.1-201ENSMUST00000227409 1279 ntBASIC18.44■□□□□ 0.54
Cux2P70298 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Cux2P70298 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cux2P70298 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cux2P70298 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Cux2P70298 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC18.44■□□□□ 0.54
Cux2P70298 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cux2P70298 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cux2P70298 Gm37391-201ENSMUST00000194891 2318 ntBASIC18.44■□□□□ 0.54
Cux2P70298 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cux2P70298 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Cux2P70298 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cux2P70298 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cux2P70298 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Cux2P70298 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cux2P70298 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cux2P70298 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC18.44■□□□□ 0.54
Cux2P70298 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cux2P70298 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms