Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm25732-201ENSMUST00000175168 60 ntBASIC9.6□□□□□ -0.87
Pdlim4P70271 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Pdlim4P70271 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC9.6□□□□□ -0.87
Pdlim4P70271 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC9.6□□□□□ -0.87
Pdlim4P70271 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC9.6□□□□□ -0.87
Pdlim4P70271 Gm42682-201ENSMUST00000198349 1265 ntBASIC9.6□□□□□ -0.87
Pdlim4P70271 Gm9445-201ENSMUST00000207454 1285 ntBASIC9.6□□□□□ -0.87
Pdlim4P70271 Gm7848-201ENSMUST00000210739 718 ntBASIC9.6□□□□□ -0.87
Pdlim4P70271 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Pdlim4P70271 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Pdlim4P70271 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Pdlim4P70271 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Pdlim4P70271 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Pdlim4P70271 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
Pdlim4P70271 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Pdlim4P70271 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Pdlim4P70271 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Pdlim4P70271 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Pdlim4P70271 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Pdlim4P70271 Gm45199-201ENSMUST00000207640 1507 ntBASIC9.6□□□□□ -0.87
Pdlim4P70271 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Pdlim4P70271 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Pdlim4P70271 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Pdlim4P70271 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Pdlim4P70271 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Pdlim4P70271 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Pdlim4P70271 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Pdlim4P70271 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Pdlim4P70271 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Pdlim4P70271 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Pdlim4P70271 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC9.59□□□□□ -0.87
Pdlim4P70271 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Pdlim4P70271 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Pdlim4P70271 AC126257.2-201ENSMUST00000215507 2300 ntBASIC9.59□□□□□ -0.87
Pdlim4P70271 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Pdlim4P70271 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Pdlim4P70271 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Pdlim4P70271 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Pdlim4P70271 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Pdlim4P70271 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Pdlim4P70271 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC9.59□□□□□ -0.87
Pdlim4P70271 Gm13461-201ENSMUST00000120980 662 ntBASIC9.59□□□□□ -0.87
Pdlim4P70271 Gm8199-201ENSMUST00000121323 823 ntBASIC9.59□□□□□ -0.87
Pdlim4P70271 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Pdlim4P70271 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC9.59□□□□□ -0.87
Pdlim4P70271 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Pdlim4P70271 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Pdlim4P70271 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC9.59□□□□□ -0.87
Pdlim4P70271 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Pdlim4P70271 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Pdlim4P70271 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Pdlim4P70271 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC9.59□□□□□ -0.87
Pdlim4P70271 Gm5733-201ENSMUST00000190232 939 ntBASIC9.59□□□□□ -0.87
Pdlim4P70271 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Pdlim4P70271 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC9.59□□□□□ -0.87
Pdlim4P70271 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Pdlim4P70271 AC134860.1-201ENSMUST00000224867 660 ntBASIC9.59□□□□□ -0.87
Pdlim4P70271 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Pdlim4P70271 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Pdlim4P70271 Ntng1-201ENSMUST00000051253 327 ntBASIC9.59□□□□□ -0.87
Pdlim4P70271 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Pdlim4P70271 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.59□□□□□ -0.87
Pdlim4P70271 Gm43172-201ENSMUST00000202139 2137 ntBASIC9.59□□□□□ -0.87
Pdlim4P70271 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Pdlim4P70271 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Pdlim4P70271 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.59□□□□□ -0.87
Pdlim4P70271 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Pdlim4P70271 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Pdlim4P70271 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.59□□□□□ -0.87
Pdlim4P70271 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Pdlim4P70271 Gm17244-201ENSMUST00000192482 3416 ntBASIC9.59□□□□□ -0.87
Pdlim4P70271 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Pdlim4P70271 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.59□□□□□ -0.88
Pdlim4P70271 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC9.59□□□□□ -0.88
Pdlim4P70271 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.58□□□□□ -0.88
Pdlim4P70271 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Pdlim4P70271 Gm43773-201ENSMUST00000198548 2162 ntBASIC9.58□□□□□ -0.88
Pdlim4P70271 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Pdlim4P70271 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.58□□□□□ -0.88
Pdlim4P70271 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.58□□□□□ -0.88
Pdlim4P70271 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Pdlim4P70271 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Pdlim4P70271 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Pdlim4P70271 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Pdlim4P70271 Gm7851-201ENSMUST00000117574 323 ntBASIC9.58□□□□□ -0.88
Pdlim4P70271 Gm11783-201ENSMUST00000119549 885 ntBASIC9.58□□□□□ -0.88
Pdlim4P70271 Gm11941-201ENSMUST00000119904 610 ntBASIC9.58□□□□□ -0.88
Pdlim4P70271 Gm13263-201ENSMUST00000121271 838 ntBASIC9.58□□□□□ -0.88
Pdlim4P70271 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms