Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgb1P63158 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Hmgb1P63158 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.68□□□□□ -0.38
Hmgb1P63158 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Hmgb1P63158 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.68□□□□□ -0.38
Hmgb1P63158 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Gm14071-201ENSMUST00000117817 509 ntBASIC12.68□□□□□ -0.38
Hmgb1P63158 Gm11783-201ENSMUST00000119549 885 ntBASIC12.68□□□□□ -0.38
Hmgb1P63158 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Gm28686-201ENSMUST00000187404 609 ntBASIC12.68□□□□□ -0.38
Hmgb1P63158 Gm3332-201ENSMUST00000189337 928 ntBASIC12.68□□□□□ -0.38
Hmgb1P63158 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Hmgb1P63158 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.68□□□□□ -0.38
Hmgb1P63158 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Hmgb1P63158 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Hmgb1P63158 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.68□□□□□ -0.38
Hmgb1P63158 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Hmgb1P63158 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.67□□□□□ -0.38
Hmgb1P63158 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC12.67□□□□□ -0.38
Hmgb1P63158 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.67□□□□□ -0.38
Hmgb1P63158 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.67□□□□□ -0.38
Hmgb1P63158 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 Gm23949-201ENSMUST00000104027 127 ntBASIC12.67□□□□□ -0.38
Hmgb1P63158 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Hmgb1P63158 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.67□□□□□ -0.38
Hmgb1P63158 Gm11663-201ENSMUST00000117888 290 ntBASIC12.67□□□□□ -0.38
Hmgb1P63158 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.67□□□□□ -0.38
Hmgb1P63158 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.67□□□□□ -0.38
Hmgb1P63158 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.67□□□□□ -0.38
Hmgb1P63158 Gm37666-201ENSMUST00000194110 866 ntBASIC12.67□□□□□ -0.38
Hmgb1P63158 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.67□□□□□ -0.38
Hmgb1P63158 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 Adh6-ps1-201ENSMUST00000171054 2789 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.67□□□□□ -0.38
Hmgb1P63158 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.67□□□□□ -0.38
Hmgb1P63158 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmgb1P63158 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hmgb1P63158 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgb1P63158 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.66□□□□□ -0.38
Hmgb1P63158 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgb1P63158 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgb1P63158 Tmem260-202ENSMUST00000124720 3035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgb1P63158 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.66□□□□□ -0.38
Hmgb1P63158 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.66□□□□□ -0.38
Hmgb1P63158 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgb1P63158 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgb1P63158 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgb1P63158 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmgb1P63158 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Hmgb1P63158 Gm23596-201ENSMUST00000104304 132 ntBASIC12.66□□□□□ -0.38
Hmgb1P63158 Gm14130-201ENSMUST00000118417 987 ntBASIC12.66□□□□□ -0.38
Hmgb1P63158 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.66□□□□□ -0.38
Hmgb1P63158 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms