Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Lsm3P62311 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm3P62311 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC10.37□□□□□ -0.75
Lsm3P62311 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm3P62311 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm3P62311 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm3P62311 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC10.37□□□□□ -0.75
Lsm3P62311 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Lsm3P62311 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm3P62311 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Lsm3P62311 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Lsm3P62311 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm3P62311 Gm5419-201ENSMUST00000119301 527 ntBASIC10.37□□□□□ -0.75
Lsm3P62311 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.37□□□□□ -0.75
Lsm3P62311 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Lsm3P62311 Gm8738-201ENSMUST00000172606 329 ntBASIC10.37□□□□□ -0.75
Lsm3P62311 Gm9192-201ENSMUST00000183221 985 ntBASIC10.37□□□□□ -0.75
Lsm3P62311 Gm6473-201ENSMUST00000188572 1210 ntBASIC10.37□□□□□ -0.75
Lsm3P62311 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Lsm3P62311 Gm43514-201ENSMUST00000198852 424 ntBASIC10.37□□□□□ -0.75
Lsm3P62311 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm3P62311 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm3P62311 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.37□□□□□ -0.75
Lsm3P62311 Gm19994-201ENSMUST00000217086 586 ntBASIC10.37□□□□□ -0.75
Lsm3P62311 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm3P62311 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Lsm3P62311 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm3P62311 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm3P62311 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm3P62311 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm3P62311 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm3P62311 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm3P62311 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC10.37□□□□□ -0.75
Lsm3P62311 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm3P62311 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Lsm3P62311 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm3P62311 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm3P62311 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm3P62311 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm3P62311 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.37□□□□□ -0.75
Lsm3P62311 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm3P62311 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm3P62311 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm3P62311 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Lsm3P62311 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Lsm3P62311 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Lsm3P62311 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.36□□□□□ -0.75
Lsm3P62311 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Lsm3P62311 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.36□□□□□ -0.75
Lsm3P62311 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.36□□□□□ -0.75
Lsm3P62311 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Lsm3P62311 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
Lsm3P62311 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Lsm3P62311 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Lsm3P62311 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.36□□□□□ -0.75
Lsm3P62311 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.36□□□□□ -0.75
Lsm3P62311 Gm18893-201ENSMUST00000198416 943 ntBASIC10.36□□□□□ -0.75
Lsm3P62311 Gm29705-201ENSMUST00000212598 474 ntBASIC10.36□□□□□ -0.75
Lsm3P62311 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.36□□□□□ -0.75
Lsm3P62311 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Lsm3P62311 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.36□□□□□ -0.75
Lsm3P62311 Wdyhv1-206ENSMUST00000227142 786 ntBASIC10.36□□□□□ -0.75
Lsm3P62311 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.36□□□□□ -0.75
Lsm3P62311 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Lsm3P62311 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Lsm3P62311 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.36□□□□□ -0.75
Lsm3P62311 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Lsm3P62311 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms