Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Sssca1P56873 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Sssca1P56873 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Sssca1P56873 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Sssca1P56873 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Gm44415-201ENSMUST00000204151 2112 ntBASIC9.25□□□□□ -0.93
Sssca1P56873 Gm29245-201ENSMUST00000187332 1416 ntBASIC9.25□□□□□ -0.93
Sssca1P56873 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC9.25□□□□□ -0.93
Sssca1P56873 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Sssca1P56873 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC9.25□□□□□ -0.93
Sssca1P56873 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC9.25□□□□□ -0.93
Sssca1P56873 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Gm11222-201ENSMUST00000119005 738 ntBASIC9.25□□□□□ -0.93
Sssca1P56873 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC9.25□□□□□ -0.93
Sssca1P56873 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC9.25□□□□□ -0.93
Sssca1P56873 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC9.25□□□□□ -0.93
Sssca1P56873 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Gm28937-201ENSMUST00000185413 695 ntBASIC9.25□□□□□ -0.93
Sssca1P56873 Gm29400-201ENSMUST00000187208 695 ntBASIC9.25□□□□□ -0.93
Sssca1P56873 Gm28662-201ENSMUST00000188446 695 ntBASIC9.25□□□□□ -0.93
Sssca1P56873 Gm28251-201ENSMUST00000188835 695 ntBASIC9.25□□□□□ -0.93
Sssca1P56873 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Gm37318-201ENSMUST00000194325 695 ntBASIC9.25□□□□□ -0.93
Sssca1P56873 Gm31256-201ENSMUST00000194705 506 ntBASIC9.25□□□□□ -0.93
Sssca1P56873 Gm38017-201ENSMUST00000194768 695 ntBASIC9.25□□□□□ -0.93
Sssca1P56873 Gm37287-201ENSMUST00000195449 695 ntBASIC9.25□□□□□ -0.93
Sssca1P56873 Gm37793-201ENSMUST00000195548 695 ntBASIC9.25□□□□□ -0.93
Sssca1P56873 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC9.25□□□□□ -0.93
Sssca1P56873 Gm45598-202ENSMUST00000210719 986 ntBASIC9.25□□□□□ -0.93
Sssca1P56873 Gzmn-202ENSMUST00000225535 989 ntBASIC9.25□□□□□ -0.93
Sssca1P56873 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Sssca1P56873 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 AC159195.3-201ENSMUST00000225162 2211 ntBASIC9.25□□□□□ -0.93
Sssca1P56873 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Gm5740-201ENSMUST00000211003 1857 ntBASIC9.25□□□□□ -0.93
Sssca1P56873 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC9.25□□□□□ -0.93
Sssca1P56873 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Sssca1P56873 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sssca1P56873 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sssca1P56873 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sssca1P56873 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sssca1P56873 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
Sssca1P56873 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.24□□□□□ -0.93
Sssca1P56873 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC9.24□□□□□ -0.93
Sssca1P56873 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Sssca1P56873 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC9.24□□□□□ -0.93
Sssca1P56873 Gm14005-209ENSMUST00000224993 1832 ntBASIC9.24□□□□□ -0.93
Sssca1P56873 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sssca1P56873 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Sssca1P56873 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Sssca1P56873 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Sssca1P56873 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Sssca1P56873 Gm1840-201ENSMUST00000051687 1432 ntBASIC9.24□□□□□ -0.93
Sssca1P56873 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Sssca1P56873 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sssca1P56873 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Sssca1P56873 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Sssca1P56873 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sssca1P56873 Gm9035-201ENSMUST00000218318 1697 ntBASIC9.24□□□□□ -0.93
Sssca1P56873 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sssca1P56873 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sssca1P56873 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.24□□□□□ -0.93
Sssca1P56873 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Sssca1P56873 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC9.24□□□□□ -0.93
Sssca1P56873 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Sssca1P56873 Gm23270-201ENSMUST00000104055 131 ntBASIC9.24□□□□□ -0.93
Sssca1P56873 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Sssca1P56873 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.24□□□□□ -0.93
Sssca1P56873 Gm11930-201ENSMUST00000117788 190 ntBASIC9.24□□□□□ -0.93
Sssca1P56873 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sssca1P56873 Gm3329-201ENSMUST00000159873 556 ntBASIC9.24□□□□□ -0.93
Sssca1P56873 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC9.24□□□□□ -0.93
Sssca1P56873 Gm27046-201ENSMUST00000182160 463 ntBASIC9.24□□□□□ -0.93
Sssca1P56873 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC9.24□□□□□ -0.93
Sssca1P56873 Gm6450-201ENSMUST00000200896 574 ntBASIC9.24□□□□□ -0.93
Sssca1P56873 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sssca1P56873 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sssca1P56873 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC9.24□□□□□ -0.93
Sssca1P56873 Gm43962-201ENSMUST00000203898 190 ntBASIC9.24□□□□□ -0.93
Sssca1P56873 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms