Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Gm5171-201ENSMUST00000214944 1415 ntBASIC13.36□□□□□ -0.27
Cacnb3P54285 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cacnb3P54285 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cacnb3P54285 Gm6024-201ENSMUST00000117850 1558 ntBASIC13.36□□□□□ -0.27
Cacnb3P54285 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cacnb3P54285 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cacnb3P54285 Smok4a-201ENSMUST00000074512 1455 ntBASIC13.36□□□□□ -0.27
Cacnb3P54285 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cacnb3P54285 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Cacnb3P54285 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cacnb3P54285 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.35□□□□□ -0.27
Cacnb3P54285 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.35□□□□□ -0.27
Cacnb3P54285 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
Cacnb3P54285 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Gm25545-201ENSMUST00000122673 323 ntBASIC13.35□□□□□ -0.27
Cacnb3P54285 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Gm25343-201ENSMUST00000157460 107 ntBASIC13.35□□□□□ -0.27
Cacnb3P54285 Gm17070-201ENSMUST00000170463 784 ntBASIC13.35□□□□□ -0.27
Cacnb3P54285 Mir6941-201ENSMUST00000184711 59 ntBASIC13.35□□□□□ -0.27
Cacnb3P54285 Gm43249-201ENSMUST00000200464 458 ntBASIC13.35□□□□□ -0.27
Cacnb3P54285 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC13.35□□□□□ -0.27
Cacnb3P54285 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC13.35□□□□□ -0.27
Cacnb3P54285 Gm44008-201ENSMUST00000204345 412 ntBASIC13.35□□□□□ -0.27
Cacnb3P54285 Gm45856-201ENSMUST00000212752 416 ntBASIC13.35□□□□□ -0.27
Cacnb3P54285 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC13.35□□□□□ -0.27
Cacnb3P54285 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.35□□□□□ -0.27
Cacnb3P54285 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Cacnb3P54285 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cacnb3P54285 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cacnb3P54285 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.34□□□□□ -0.27
Cacnb3P54285 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC13.34□□□□□ -0.27
Cacnb3P54285 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC13.34□□□□□ -0.27
Cacnb3P54285 Gm13019-201ENSMUST00000120000 276 ntBASIC13.34□□□□□ -0.27
Cacnb3P54285 Gm13284-201ENSMUST00000121020 547 ntBASIC13.34□□□□□ -0.27
Cacnb3P54285 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Olfml3-204ENSMUST00000169286 874 ntBASIC13.34□□□□□ -0.27
Cacnb3P54285 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.34□□□□□ -0.27
Cacnb3P54285 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Gm19640-201ENSMUST00000214849 464 ntBASIC13.34□□□□□ -0.27
Cacnb3P54285 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.34□□□□□ -0.27
Cacnb3P54285 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Cacnb3P54285 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cacnb3P54285 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cacnb3P54285 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Cacnb3P54285 Gm28424-201ENSMUST00000187393 1319 ntBASIC13.34□□□□□ -0.27
Cacnb3P54285 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cacnb3P54285 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cacnb3P54285 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms