Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Msh6P54276 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Msh6P54276 Gm11957-201ENSMUST00000118304 779 ntBASIC14.48□□□□□ -0.09
Msh6P54276 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Msh6P54276 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC14.48□□□□□ -0.09
Msh6P54276 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Msh6P54276 Gm12906-201ENSMUST00000154610 441 ntBASIC14.48□□□□□ -0.09
Msh6P54276 Gm16167-201ENSMUST00000160428 1065 ntBASIC14.48□□□□□ -0.09
Msh6P54276 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh6P54276 Gm37284-201ENSMUST00000193607 539 ntBASIC14.48□□□□□ -0.09
Msh6P54276 Gm9369-201ENSMUST00000196009 733 ntBASIC14.48□□□□□ -0.09
Msh6P54276 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC14.48□□□□□ -0.09
Msh6P54276 Gm2594-201ENSMUST00000214774 742 ntBASIC14.48□□□□□ -0.09
Msh6P54276 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh6P54276 AC154589.2-201ENSMUST00000228847 251 ntBASIC14.48□□□□□ -0.09
Msh6P54276 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh6P54276 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh6P54276 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Msh6P54276 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Msh6P54276 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Msh6P54276 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh6P54276 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Msh6P54276 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh6P54276 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh6P54276 Gm18806-201ENSMUST00000207607 1775 ntBASIC14.48□□□□□ -0.09
Msh6P54276 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.48□□□□□ -0.09
Msh6P54276 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Msh6P54276 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Msh6P54276 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh6P54276 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh6P54276 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh6P54276 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh6P54276 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC14.48□□□□□ -0.09
Msh6P54276 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Msh6P54276 Gm5740-201ENSMUST00000211003 1857 ntBASIC14.48□□□□□ -0.09
Msh6P54276 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Msh6P54276 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Msh6P54276 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Msh6P54276 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Msh6P54276 Gm23612-201ENSMUST00000103823 110 ntBASIC14.47□□□□□ -0.09
Msh6P54276 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Msh6P54276 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Msh6P54276 Gm11996-201ENSMUST00000117538 915 ntBASIC14.47□□□□□ -0.09
Msh6P54276 Gm15197-201ENSMUST00000120526 478 ntBASIC14.47□□□□□ -0.09
Msh6P54276 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC14.47□□□□□ -0.09
Msh6P54276 Gm25604-201ENSMUST00000158359 133 ntBASIC14.47□□□□□ -0.09
Msh6P54276 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC14.47□□□□□ -0.09
Msh6P54276 Gm23576-201ENSMUST00000179918 110 ntBASIC14.47□□□□□ -0.09
Msh6P54276 Gm37365-201ENSMUST00000193109 409 ntBASIC14.47□□□□□ -0.09
Msh6P54276 Gm5340-201ENSMUST00000203733 880 ntBASIC14.47□□□□□ -0.09
Msh6P54276 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Msh6P54276 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Msh6P54276 Gm8420-201ENSMUST00000097103 598 ntBASIC14.47□□□□□ -0.09
Msh6P54276 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Msh6P54276 Gm45776-201ENSMUST00000212366 1522 ntBASIC14.47□□□□□ -0.09
Msh6P54276 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Msh6P54276 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Msh6P54276 AC154537.1-201ENSMUST00000226101 1304 ntBASIC14.47□□□□□ -0.09
Msh6P54276 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Msh6P54276 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Msh6P54276 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Msh6P54276 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Msh6P54276 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Msh6P54276 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Msh6P54276 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Msh6P54276 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Msh6P54276 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Msh6P54276 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Msh6P54276 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Msh6P54276 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Msh6P54276 Gm37542-201ENSMUST00000192563 2832 ntBASIC14.47□□□□□ -0.09
Msh6P54276 Gm25562-201ENSMUST00000104608 133 ntBASIC14.47□□□□□ -0.09
Msh6P54276 Gm12389-201ENSMUST00000117696 418 ntBASIC14.47□□□□□ -0.09
Msh6P54276 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Msh6P54276 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC14.47□□□□□ -0.09
Msh6P54276 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Msh6P54276 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Msh6P54276 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Msh6P54276 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Msh6P54276 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC14.46□□□□□ -0.09
Msh6P54276 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Msh6P54276 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Msh6P54276 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Msh6P54276 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Msh6P54276 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Msh6P54276 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Msh6P54276 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Msh6P54276 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Msh6P54276 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Msh6P54276 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Msh6P54276 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Msh6P54276 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Msh6P54276 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Msh6P54276 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Msh6P54276 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Msh6P54276 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Msh6P54276 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Msh6P54276 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Msh6P54276 Gm22594-201ENSMUST00000104251 130 ntBASIC14.46□□□□□ -0.1
Msh6P54276 Mir453-201ENSMUST00000104732 82 ntBASIC14.46□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms