Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Sox3P53784 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Sox3P53784 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox3P53784 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox3P53784 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.06□□□□□ -0.64
Sox3P53784 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox3P53784 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox3P53784 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox3P53784 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.06□□□□□ -0.64
Sox3P53784 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox3P53784 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox3P53784 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox3P53784 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox3P53784 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.06□□□□□ -0.64
Sox3P53784 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox3P53784 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox3P53784 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sox3P53784 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox3P53784 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox3P53784 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.06□□□□□ -0.64
Sox3P53784 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Sox3P53784 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sox3P53784 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.05□□□□□ -0.64
Sox3P53784 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sox3P53784 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Sox3P53784 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.05□□□□□ -0.64
Sox3P53784 Gm12783-201ENSMUST00000121425 397 ntBASIC11.05□□□□□ -0.64
Sox3P53784 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox3P53784 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sox3P53784 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Sox3P53784 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.05□□□□□ -0.64
Sox3P53784 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.05□□□□□ -0.64
Sox3P53784 Gm18059-201ENSMUST00000208073 580 ntBASIC11.05□□□□□ -0.64
Sox3P53784 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.05□□□□□ -0.64
Sox3P53784 Gm7959-201ENSMUST00000221823 1078 ntBASIC11.05□□□□□ -0.64
Sox3P53784 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.05□□□□□ -0.64
Sox3P53784 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.05□□□□□ -0.64
Sox3P53784 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.05□□□□□ -0.64
Sox3P53784 Gm15784-201ENSMUST00000120260 1462 ntBASIC11.05□□□□□ -0.64
Sox3P53784 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.05□□□□□ -0.64
Sox3P53784 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.05□□□□□ -0.64
Sox3P53784 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Sox3P53784 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Sox3P53784 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sox3P53784 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox3P53784 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox3P53784 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox3P53784 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox3P53784 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox3P53784 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Sox3P53784 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox3P53784 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sox3P53784 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox3P53784 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Sox3P53784 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox3P53784 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.04□□□□□ -0.64
Sox3P53784 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC11.04□□□□□ -0.64
Sox3P53784 Gm14274-201ENSMUST00000117182 615 ntBASIC11.04□□□□□ -0.64
Sox3P53784 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.04□□□□□ -0.64
Sox3P53784 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.04□□□□□ -0.64
Sox3P53784 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.04□□□□□ -0.64
Sox3P53784 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.04□□□□□ -0.64
Sox3P53784 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.04□□□□□ -0.64
Sox3P53784 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sox3P53784 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox3P53784 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.04□□□□□ -0.64
Sox3P53784 Gm21092-201ENSMUST00000178995 955 ntBASIC11.04□□□□□ -0.64
Sox3P53784 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.04□□□□□ -0.64
Sox3P53784 Gm43752-201ENSMUST00000198475 697 ntBASIC11.04□□□□□ -0.64
Sox3P53784 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.04□□□□□ -0.64
Sox3P53784 Gm45500-201ENSMUST00000211676 803 ntBASIC11.04□□□□□ -0.64
Sox3P53784 Gm45594-201ENSMUST00000211717 241 ntBASIC11.04□□□□□ -0.64
Sox3P53784 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms