Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox1P53783 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox1P53783 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox1P53783 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sox1P53783 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.77□□□□□ -0.52
Sox1P53783 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sox1P53783 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox1P53783 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox1P53783 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Sox1P53783 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox1P53783 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox1P53783 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.77□□□□□ -0.53
Sox1P53783 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox1P53783 Gm4294-201ENSMUST00000105169 614 ntBASIC11.77□□□□□ -0.53
Sox1P53783 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox1P53783 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Sox1P53783 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox1P53783 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox1P53783 Gm15373-201ENSMUST00000121495 214 ntBASIC11.77□□□□□ -0.53
Sox1P53783 Gm8464-202ENSMUST00000146697 1142 ntBASIC11.77□□□□□ -0.53
Sox1P53783 Gm4750-201ENSMUST00000151942 1142 ntBASIC11.77□□□□□ -0.53
Sox1P53783 Gm16547-201ENSMUST00000159474 293 ntBASIC11.77□□□□□ -0.53
Sox1P53783 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox1P53783 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC11.77□□□□□ -0.53
Sox1P53783 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Sox1P53783 Gm23694-201ENSMUST00000179335 110 ntBASIC11.77□□□□□ -0.53
Sox1P53783 Gm7833-201ENSMUST00000183288 990 ntBASIC11.77□□□□□ -0.53
Sox1P53783 Gm5254-201ENSMUST00000188353 977 ntBASIC11.77□□□□□ -0.53
Sox1P53783 Gm20781-201ENSMUST00000193154 693 ntBASIC11.77□□□□□ -0.53
Sox1P53783 Gm21736-201ENSMUST00000195399 693 ntBASIC11.77□□□□□ -0.53
Sox1P53783 Gm44908-201ENSMUST00000208610 266 ntBASIC11.77□□□□□ -0.53
Sox1P53783 Gm9644-201ENSMUST00000212828 1183 ntBASIC11.77□□□□□ -0.53
Sox1P53783 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox1P53783 AC118639.1-202ENSMUST00000226957 653 ntBASIC11.77□□□□□ -0.53
Sox1P53783 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox1P53783 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox1P53783 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox1P53783 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sox1P53783 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox1P53783 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox1P53783 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Sox1P53783 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox1P53783 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox1P53783 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox1P53783 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox1P53783 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Sox1P53783 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Sox1P53783 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sox1P53783 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.53
Sox1P53783 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.76□□□□□ -0.53
Sox1P53783 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox1P53783 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Sox1P53783 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox1P53783 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox1P53783 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox1P53783 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox1P53783 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox1P53783 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox1P53783 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox1P53783 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox1P53783 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sox1P53783 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.76□□□□□ -0.53
Sox1P53783 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox1P53783 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox1P53783 Gm16219-201ENSMUST00000120096 274 ntBASIC11.76□□□□□ -0.53
Sox1P53783 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.76□□□□□ -0.53
Sox1P53783 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox1P53783 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox1P53783 Gm44323-201ENSMUST00000198689 129 ntBASIC11.76□□□□□ -0.53
Sox1P53783 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox1P53783 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox1P53783 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sox1P53783 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox1P53783 Gm5292-201ENSMUST00000073317 580 ntBASIC11.76□□□□□ -0.53
Sox1P53783 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox1P53783 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox1P53783 Gm13456-201ENSMUST00000118928 1365 ntBASIC11.76□□□□□ -0.53
Sox1P53783 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox1P53783 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox1P53783 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.76□□□□□ -0.53
Sox1P53783 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sox1P53783 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox1P53783 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sox1P53783 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox1P53783 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.75□□□□□ -0.53
Sox1P53783 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Sox1P53783 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sox1P53783 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Sox1P53783 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox1P53783 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.75□□□□□ -0.53
Sox1P53783 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox1P53783 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox1P53783 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox1P53783 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sox1P53783 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sox1P53783 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sox1P53783 Gm8659-201ENSMUST00000120024 1084 ntBASIC11.75□□□□□ -0.53
Sox1P53783 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox1P53783 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sox1P53783 Mir1941-201ENSMUST00000157834 83 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms