Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox2P48432 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox2P48432 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox2P48432 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox2P48432 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox2P48432 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox2P48432 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox2P48432 Gm23270-201ENSMUST00000104055 131 ntBASIC10.71□□□□□ -0.69
Sox2P48432 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
Sox2P48432 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.71□□□□□ -0.69
Sox2P48432 Gm15370-201ENSMUST00000117158 253 ntBASIC10.71□□□□□ -0.69
Sox2P48432 Gm11500-201ENSMUST00000118237 601 ntBASIC10.71□□□□□ -0.69
Sox2P48432 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox2P48432 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.71□□□□□ -0.69
Sox2P48432 Gm3329-201ENSMUST00000159873 556 ntBASIC10.71□□□□□ -0.69
Sox2P48432 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.71□□□□□ -0.69
Sox2P48432 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox2P48432 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.71□□□□□ -0.69
Sox2P48432 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Sox2P48432 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox2P48432 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Sox2P48432 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.71□□□□□ -0.69
Sox2P48432 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox2P48432 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.71□□□□□ -0.69
Sox2P48432 Gm29396-201ENSMUST00000185659 716 ntBASIC10.71□□□□□ -0.69
Sox2P48432 Gm3096-201ENSMUST00000185770 364 ntBASIC10.71□□□□□ -0.69
Sox2P48432 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.71□□□□□ -0.69
Sox2P48432 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
Sox2P48432 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Sox2P48432 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox2P48432 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.71□□□□□ -0.69
Sox2P48432 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Sox2P48432 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox2P48432 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox2P48432 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox2P48432 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox2P48432 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox2P48432 Gm9823-201ENSMUST00000051212 327 ntBASIC10.71□□□□□ -0.69
Sox2P48432 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Sox2P48432 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox2P48432 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox2P48432 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox2P48432 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox2P48432 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox2P48432 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox2P48432 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Sox2P48432 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox2P48432 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox2P48432 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox2P48432 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox2P48432 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox2P48432 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox2P48432 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox2P48432 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.7□□□□□ -0.7
Sox2P48432 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.7□□□□□ -0.7
Sox2P48432 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.7□□□□□ -0.7
Sox2P48432 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Sox2P48432 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Sox2P48432 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Sox2P48432 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.7□□□□□ -0.7
Sox2P48432 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.7□□□□□ -0.7
Sox2P48432 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Sox2P48432 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Sox2P48432 Gm14071-201ENSMUST00000117817 509 ntBASIC10.7□□□□□ -0.7
Sox2P48432 Gm15824-201ENSMUST00000119516 955 ntBASIC10.7□□□□□ -0.7
Sox2P48432 Gm11424-201ENSMUST00000121929 829 ntBASIC10.7□□□□□ -0.7
Sox2P48432 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.7□□□□□ -0.7
Sox2P48432 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Sox2P48432 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.7□□□□□ -0.7
Sox2P48432 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.7□□□□□ -0.7
Sox2P48432 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.7□□□□□ -0.7
Sox2P48432 Gm19309-201ENSMUST00000218295 205 ntBASIC10.7□□□□□ -0.7
Sox2P48432 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.7□□□□□ -0.7
Sox2P48432 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Sox2P48432 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox2P48432 Gm42602-201ENSMUST00000200288 3224 ntBASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms