Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gm12622-201ENSMUST00000177975 382 ntBASIC11.66□□□□□ -0.54
Vps4bP46467 Gm12627-201ENSMUST00000178412 382 ntBASIC11.66□□□□□ -0.54
Vps4bP46467 Gm12625-201ENSMUST00000179122 382 ntBASIC11.66□□□□□ -0.54
Vps4bP46467 Gm12614-201ENSMUST00000179586 382 ntBASIC11.66□□□□□ -0.54
Vps4bP46467 Gm12613-201ENSMUST00000180323 382 ntBASIC11.66□□□□□ -0.54
Vps4bP46467 Gm5523-201ENSMUST00000180415 997 ntBASIC11.66□□□□□ -0.54
Vps4bP46467 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.66□□□□□ -0.54
Vps4bP46467 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.66□□□□□ -0.54
Vps4bP46467 Gm8913-201ENSMUST00000209491 641 ntBASIC11.66□□□□□ -0.54
Vps4bP46467 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Vps4bP46467 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.66□□□□□ -0.54
Vps4bP46467 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.66□□□□□ -0.54
Vps4bP46467 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Vps4bP46467 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps4bP46467 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps4bP46467 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Vps4bP46467 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Vps4bP46467 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps4bP46467 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps4bP46467 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps4bP46467 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps4bP46467 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Vps4bP46467 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps4bP46467 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps4bP46467 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps4bP46467 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps4bP46467 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps4bP46467 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps4bP46467 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.66□□□□□ -0.54
Vps4bP46467 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
Vps4bP46467 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Vps4bP46467 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Vps4bP46467 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Vps4bP46467 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.65□□□□□ -0.54
Vps4bP46467 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.65□□□□□ -0.54
Vps4bP46467 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Vps4bP46467 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Vps4bP46467 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.65□□□□□ -0.54
Vps4bP46467 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Vps4bP46467 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Vps4bP46467 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Gm14071-201ENSMUST00000117817 509 ntBASIC11.65□□□□□ -0.54
Vps4bP46467 Gm11331-201ENSMUST00000119764 288 ntBASIC11.65□□□□□ -0.54
Vps4bP46467 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.65□□□□□ -0.54
Vps4bP46467 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.65□□□□□ -0.54
Vps4bP46467 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.65□□□□□ -0.54
Vps4bP46467 Gm28686-201ENSMUST00000187404 609 ntBASIC11.65□□□□□ -0.54
Vps4bP46467 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Vps4bP46467 Gm45433-201ENSMUST00000209386 247 ntBASIC11.65□□□□□ -0.54
Vps4bP46467 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Vps4bP46467 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Vps4bP46467 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.65□□□□□ -0.54
Vps4bP46467 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Vps4bP46467 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps4bP46467 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Vps4bP46467 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Vps4bP46467 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Vps4bP46467 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Vps4bP46467 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Vps4bP46467 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Vps4bP46467 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps4bP46467 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms