Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm8342-201ENSMUST00000209839 757 ntBASIC11.3□□□□□ -0.6
Sox18P43680 Gm45527-201ENSMUST00000211052 774 ntBASIC11.3□□□□□ -0.6
Sox18P43680 Gm6390-201ENSMUST00000215034 589 ntBASIC11.3□□□□□ -0.6
Sox18P43680 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.3□□□□□ -0.6
Sox18P43680 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.3□□□□□ -0.6
Sox18P43680 Speer6-ps1-203ENSMUST00000223482 979 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 AC158388.3-202ENSMUST00000225517 775 ntBASIC11.3□□□□□ -0.6
Sox18P43680 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.3□□□□□ -0.6
Sox18P43680 Gm5451-201ENSMUST00000080545 579 ntBASIC11.3□□□□□ -0.6
Sox18P43680 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Sox18P43680 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Sox18P43680 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.3□□□□□ -0.6
Sox18P43680 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.3□□□□□ -0.6
Sox18P43680 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.3□□□□□ -0.6
Sox18P43680 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.3□□□□□ -0.6
Sox18P43680 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Sox18P43680 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox18P43680 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Sox18P43680 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.29□□□□□ -0.6
Sox18P43680 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.29□□□□□ -0.6
Sox18P43680 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.29□□□□□ -0.6
Sox18P43680 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.29□□□□□ -0.6
Sox18P43680 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Sox18P43680 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.29□□□□□ -0.6
Sox18P43680 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Sox18P43680 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Gm14892-201ENSMUST00000117636 267 ntBASIC11.29□□□□□ -0.6
Sox18P43680 Gm11578-201ENSMUST00000118530 459 ntBASIC11.29□□□□□ -0.6
Sox18P43680 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.29□□□□□ -0.6
Sox18P43680 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC11.29□□□□□ -0.6
Sox18P43680 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11.29□□□□□ -0.6
Sox18P43680 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.29□□□□□ -0.6
Sox18P43680 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.29□□□□□ -0.6
Sox18P43680 Gm37676-201ENSMUST00000195496 507 ntBASIC11.29□□□□□ -0.6
Sox18P43680 Gm6855-201ENSMUST00000206307 790 ntBASIC11.29□□□□□ -0.6
Sox18P43680 Gm45135-201ENSMUST00000206787 1184 ntBASIC11.29□□□□□ -0.6
Sox18P43680 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC11.29□□□□□ -0.6
Sox18P43680 Gm45299-202ENSMUST00000211011 765 ntTSL 5 BASIC11.29□□□□□ -0.6
Sox18P43680 AC159886.1-201ENSMUST00000217099 1091 ntBASIC11.29□□□□□ -0.6
Sox18P43680 BC106175-202ENSMUST00000219344 1213 ntBASIC11.29□□□□□ -0.6
Sox18P43680 AC134254.4-201ENSMUST00000223086 370 ntBASIC11.29□□□□□ -0.6
Sox18P43680 AC163038.1-201ENSMUST00000223632 1142 ntBASIC11.29□□□□□ -0.6
Sox18P43680 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Sox18P43680 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.29□□□□□ -0.6
Sox18P43680 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Sox18P43680 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.29□□□□□ -0.6
Sox18P43680 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
Sox18P43680 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.29□□□□□ -0.6
Sox18P43680 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox18P43680 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.28□□□□□ -0.6
Sox18P43680 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC11.28□□□□□ -0.6
Sox18P43680 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox18P43680 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms