Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.06□□□□□ -0.64
Tnfsf4P43488 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.06□□□□□ -0.64
Tnfsf4P43488 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm12463-201ENSMUST00000118271 849 ntBASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm13665-201ENSMUST00000120830 528 ntBASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm20482-202ENSMUST00000174729 825 ntBASIC11.06□□□□□ -0.64
Tnfsf4P43488 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm29615-201ENSMUST00000185371 697 ntBASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm28224-201ENSMUST00000186078 697 ntBASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm29001-201ENSMUST00000186177 697 ntBASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm28292-201ENSMUST00000186593 697 ntBASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm28101-201ENSMUST00000187608 697 ntBASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm29076-201ENSMUST00000187689 697 ntBASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm28302-201ENSMUST00000187931 697 ntBASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm28646-201ENSMUST00000188220 697 ntBASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm28205-201ENSMUST00000189177 697 ntBASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm29032-201ENSMUST00000189797 697 ntBASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm28695-201ENSMUST00000190300 697 ntBASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm37448-201ENSMUST00000192795 697 ntBASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm44967-201ENSMUST00000207047 631 ntBASIC11.06□□□□□ -0.64
Tnfsf4P43488 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.06□□□□□ -0.64
Tnfsf4P43488 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm26448-201ENSMUST00000082446 203 ntBASIC11.06□□□□□ -0.64
Tnfsf4P43488 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.06□□□□□ -0.64
Tnfsf4P43488 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Tnfsf4P43488 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.06□□□□□ -0.64
Tnfsf4P43488 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.06□□□□□ -0.64
Tnfsf4P43488 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Tnfsf4P43488 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Tnfsf4P43488 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Gm14127-201ENSMUST00000117906 678 ntBASIC11.05□□□□□ -0.64
Tnfsf4P43488 Gm11783-201ENSMUST00000119549 885 ntBASIC11.05□□□□□ -0.64
Tnfsf4P43488 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.05□□□□□ -0.64
Tnfsf4P43488 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Tnfsf4P43488 Gm28686-201ENSMUST00000187404 609 ntBASIC11.05□□□□□ -0.64
Tnfsf4P43488 Gm44364-201ENSMUST00000198368 141 ntBASIC11.05□□□□□ -0.64
Tnfsf4P43488 Gm44008-201ENSMUST00000204345 412 ntBASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms