Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nkx1-2P42580 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Gm37122-201ENSMUST00000195313 1567 ntBASIC14.09□□□□□ -0.15
Nkx1-2P42580 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.09□□□□□ -0.15
Nkx1-2P42580 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.09□□□□□ -0.15
Nkx1-2P42580 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.09□□□□□ -0.15
Nkx1-2P42580 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Nkx1-2P42580 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx1-2P42580 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Nkx1-2P42580 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Nkx1-2P42580 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Nkx1-2P42580 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx1-2P42580 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx1-2P42580 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx1-2P42580 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx1-2P42580 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nkx1-2P42580 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx1-2P42580 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx1-2P42580 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx1-2P42580 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC14.08□□□□□ -0.16
Nkx1-2P42580 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx1-2P42580 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Nkx1-2P42580 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.08□□□□□ -0.16
Nkx1-2P42580 Gm14071-201ENSMUST00000117817 509 ntBASIC14.08□□□□□ -0.16
Nkx1-2P42580 Gm11500-201ENSMUST00000118237 601 ntBASIC14.08□□□□□ -0.16
Nkx1-2P42580 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.08□□□□□ -0.16
Nkx1-2P42580 Gm18038-201ENSMUST00000197900 485 ntBASIC14.08□□□□□ -0.16
Nkx1-2P42580 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx1-2P42580 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx1-2P42580 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nkx1-2P42580 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC14.08□□□□□ -0.16
Nkx1-2P42580 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx1-2P42580 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx1-2P42580 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx1-2P42580 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx1-2P42580 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx1-2P42580 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx1-2P42580 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx1-2P42580 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx1-2P42580 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC14.07□□□□□ -0.16
Nkx1-2P42580 Gm8752-201ENSMUST00000173427 1694 ntBASIC14.07□□□□□ -0.16
Nkx1-2P42580 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx1-2P42580 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx1-2P42580 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx1-2P42580 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx1-2P42580 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC14.07□□□□□ -0.16
Nkx1-2P42580 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx1-2P42580 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx1-2P42580 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Nkx1-2P42580 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx1-2P42580 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nkx1-2P42580 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx1-2P42580 Gm23596-201ENSMUST00000104304 132 ntBASIC14.07□□□□□ -0.16
Nkx1-2P42580 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx1-2P42580 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx1-2P42580 Gm12857-201ENSMUST00000117678 592 ntBASIC14.07□□□□□ -0.16
Nkx1-2P42580 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.07□□□□□ -0.16
Nkx1-2P42580 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nkx1-2P42580 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx1-2P42580 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.07□□□□□ -0.16
Nkx1-2P42580 Mir7677-201ENSMUST00000184226 67 ntBASIC14.07□□□□□ -0.16
Nkx1-2P42580 Gm28071-201ENSMUST00000190355 478 ntBASIC14.07□□□□□ -0.16
Nkx1-2P42580 Igkv2-116-201ENSMUST00000199327 362 ntBASIC14.07□□□□□ -0.16
Nkx1-2P42580 Rps4l-202ENSMUST00000204242 789 ntBASIC14.07□□□□□ -0.16
Nkx1-2P42580 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.07□□□□□ -0.16
Nkx1-2P42580 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nkx1-2P42580 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms