Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.11□□□□□ -0.63
TfamP40630 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.11□□□□□ -0.63
TfamP40630 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.11□□□□□ -0.63
TfamP40630 Gm14071-201ENSMUST00000117817 509 ntBASIC11.11□□□□□ -0.63
TfamP40630 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.11□□□□□ -0.63
TfamP40630 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.11□□□□□ -0.63
TfamP40630 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.11□□□□□ -0.63
TfamP40630 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
TfamP40630 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Gm37666-201ENSMUST00000194110 866 ntBASIC11.11□□□□□ -0.63
TfamP40630 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.11□□□□□ -0.63
TfamP40630 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.11□□□□□ -0.63
TfamP40630 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
TfamP40630 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
TfamP40630 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
TfamP40630 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.11□□□□□ -0.63
TfamP40630 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
TfamP40630 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
TfamP40630 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
TfamP40630 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
TfamP40630 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
TfamP40630 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
TfamP40630 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TfamP40630 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
TfamP40630 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
TfamP40630 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.1□□□□□ -0.63
TfamP40630 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.1□□□□□ -0.63
TfamP40630 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
TfamP40630 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.1□□□□□ -0.63
TfamP40630 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Gm23949-201ENSMUST00000104027 127 ntBASIC11.1□□□□□ -0.63
TfamP40630 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
TfamP40630 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
TfamP40630 Gm24749-201ENSMUST00000157838 343 ntBASIC11.1□□□□□ -0.63
TfamP40630 Mir1938-201ENSMUST00000158746 100 ntBASIC11.1□□□□□ -0.63
TfamP40630 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.1□□□□□ -0.63
TfamP40630 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.1□□□□□ -0.63
TfamP40630 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.1□□□□□ -0.63
TfamP40630 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.1□□□□□ -0.63
TfamP40630 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.1□□□□□ -0.63
TfamP40630 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
TfamP40630 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.1□□□□□ -0.63
TfamP40630 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
TfamP40630 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TfamP40630 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.1□□□□□ -0.63
TfamP40630 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms