Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cxcl12P40224 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.8□□□□□ -0.52
Cxcl12P40224 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cxcl12P40224 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.8□□□□□ -0.52
Cxcl12P40224 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC11.8□□□□□ -0.52
Cxcl12P40224 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Gm4868-201ENSMUST00000164138 789 ntBASIC11.8□□□□□ -0.52
Cxcl12P40224 Gm7572-201ENSMUST00000182616 766 ntBASIC11.8□□□□□ -0.52
Cxcl12P40224 Ighv1-70-201ENSMUST00000196509 351 ntBASIC11.8□□□□□ -0.52
Cxcl12P40224 Ighv1-86-201ENSMUST00000200562 353 ntBASIC11.8□□□□□ -0.52
Cxcl12P40224 Gm30055-201ENSMUST00000203175 803 ntBASIC11.8□□□□□ -0.52
Cxcl12P40224 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.8□□□□□ -0.52
Cxcl12P40224 AC103672.1-201ENSMUST00000227502 365 ntBASIC11.8□□□□□ -0.52
Cxcl12P40224 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Gm10020-201ENSMUST00000081993 612 ntBASIC11.8□□□□□ -0.52
Cxcl12P40224 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.8□□□□□ -0.52
Cxcl12P40224 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cxcl12P40224 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.8□□□□□ -0.52
Cxcl12P40224 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.8□□□□□ -0.52
Cxcl12P40224 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.8□□□□□ -0.52
Cxcl12P40224 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cxcl12P40224 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Matn2-206ENSMUST00000228570 2798 ntBASIC11.79□□□□□ -0.52
Cxcl12P40224 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cxcl12P40224 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cxcl12P40224 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cxcl12P40224 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cxcl12P40224 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cxcl12P40224 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Cxcl12P40224 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC11.79□□□□□ -0.52
Cxcl12P40224 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.79□□□□□ -0.52
Cxcl12P40224 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC11.79□□□□□ -0.52
Cxcl12P40224 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Cxcl12P40224 Gm36982-201ENSMUST00000193796 1128 ntBASIC11.79□□□□□ -0.52
Cxcl12P40224 Gm19918-201ENSMUST00000194858 400 ntBASIC11.79□□□□□ -0.52
Cxcl12P40224 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC11.79□□□□□ -0.52
Cxcl12P40224 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cxcl12P40224 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Cxcl12P40224 AC134601.2-201ENSMUST00000221071 130 ntBASIC11.79□□□□□ -0.52
Cxcl12P40224 AC158986.2-201ENSMUST00000227487 618 ntBASIC11.79□□□□□ -0.52
Cxcl12P40224 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cxcl12P40224 Rps3a2-201ENSMUST00000074245 792 ntBASIC11.79□□□□□ -0.52
Cxcl12P40224 Rps3a3-201ENSMUST00000074680 795 ntBASIC11.79□□□□□ -0.52
Cxcl12P40224 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
Cxcl12P40224 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cxcl12P40224 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cxcl12P40224 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.78□□□□□ -0.52
Cxcl12P40224 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl12P40224 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl12P40224 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cxcl12P40224 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms