Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd1P40201 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd1P40201 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd1P40201 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd1P40201 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd1P40201 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd1P40201 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Chd1P40201 Gm16439-201ENSMUST00000100687 564 ntBASIC16.82■□□□□ 0.28
Chd1P40201 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC16.82■□□□□ 0.28
Chd1P40201 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd1P40201 Gm8864-201ENSMUST00000118653 1010 ntBASIC16.82■□□□□ 0.28
Chd1P40201 Gm8809-201ENSMUST00000119367 743 ntBASIC16.82■□□□□ 0.28
Chd1P40201 Gm15727-201ENSMUST00000122416 437 ntBASIC16.82■□□□□ 0.28
Chd1P40201 1700010K24Rik-201ENSMUST00000125852 226 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd1P40201 Gm11608-202ENSMUST00000153049 877 ntTSL 3 BASIC16.82■□□□□ 0.28
Chd1P40201 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC16.82■□□□□ 0.28
Chd1P40201 Gm5627-201ENSMUST00000178539 931 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd1P40201 Gm7812-201ENSMUST00000203479 874 ntBASIC16.82■□□□□ 0.28
Chd1P40201 Gm19228-201ENSMUST00000214030 717 ntBASIC16.82■□□□□ 0.28
Chd1P40201 AC165092.1-201ENSMUST00000224018 486 ntBASIC16.82■□□□□ 0.28
Chd1P40201 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd1P40201 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.81■□□□□ 0.28
Chd1P40201 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Chd1P40201 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd1P40201 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Chd1P40201 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd1P40201 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd1P40201 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd1P40201 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Chd1P40201 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd1P40201 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd1P40201 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC16.81■□□□□ 0.28
Chd1P40201 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC16.81■□□□□ 0.28
Chd1P40201 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC16.81■□□□□ 0.28
Chd1P40201 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chd1P40201 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC16.81■□□□□ 0.28
Chd1P40201 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC16.81■□□□□ 0.28
Chd1P40201 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
Chd1P40201 Baat-202ENSMUST00000166036 1263 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Chd1P40201 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chd1P40201 Gm43097-201ENSMUST00000196867 151 ntBASIC16.81■□□□□ 0.28
Chd1P40201 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chd1P40201 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Chd1P40201 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd1P40201 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd1P40201 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC16.81■□□□□ 0.28
Chd1P40201 Gm45847-201ENSMUST00000209402 1880 ntTSL 3 BASIC16.81■□□□□ 0.28
Chd1P40201 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd1P40201 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Chd1P40201 3110001I22Rik-201ENSMUST00000035426 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd1P40201 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chd1P40201 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chd1P40201 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chd1P40201 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chd1P40201 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC16.81■□□□□ 0.28
Chd1P40201 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Chd1P40201 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd1P40201 Gm20633-201ENSMUST00000176742 2831 ntBASIC16.8■□□□□ 0.28
Chd1P40201 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.8■□□□□ 0.28
Chd1P40201 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd1P40201 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd1P40201 Cog5-201ENSMUST00000036862 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd1P40201 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chd1P40201 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Chd1P40201 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd1P40201 Gm5046-201ENSMUST00000100608 611 ntBASIC16.8■□□□□ 0.28
Chd1P40201 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Chd1P40201 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chd1P40201 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chd1P40201 Gm44716-201ENSMUST00000209007 710 ntBASIC16.8■□□□□ 0.28
Chd1P40201 Gm18122-201ENSMUST00000211390 904 ntBASIC16.8■□□□□ 0.28
Chd1P40201 Gm18504-201ENSMUST00000220917 929 ntBASIC16.8■□□□□ 0.28
Chd1P40201 AC123533.3-201ENSMUST00000228056 454 ntBASIC16.8■□□□□ 0.28
Chd1P40201 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chd1P40201 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chd1P40201 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Chd1P40201 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Chd1P40201 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC16.8■□□□□ 0.28
Chd1P40201 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd1P40201 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd1P40201 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd1P40201 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Chd1P40201 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd1P40201 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chd1P40201 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Chd1P40201 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Chd1P40201 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Chd1P40201 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC16.79■□□□□ 0.28
Chd1P40201 Gm15661-201ENSMUST00000117390 556 ntBASIC16.79■□□□□ 0.28
Chd1P40201 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Gm3355-201ENSMUST00000160079 487 ntBASIC16.79■□□□□ 0.28
Chd1P40201 Ly6c1-206ENSMUST00000188845 784 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
Chd1P40201 Gm7539-201ENSMUST00000189789 630 ntBASIC16.79■□□□□ 0.28
Chd1P40201 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 Gm37860-201ENSMUST00000195380 1034 ntBASIC16.79■□□□□ 0.28
Chd1P40201 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC16.79■□□□□ 0.28
Chd1P40201 8030423J24Rik-201ENSMUST00000022091 869 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chd1P40201 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC16.79■□□□□ 0.28
Chd1P40201 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC16.79■□□□□ 0.28
Chd1P40201 AC123698.1-201ENSMUST00000227090 402 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms