Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Fen1P39749 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Fen1P39749 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.55□□□□□ -0.56
Fen1P39749 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.55□□□□□ -0.56
Fen1P39749 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.55□□□□□ -0.56
Fen1P39749 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Fen1P39749 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Fen1P39749 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Fen1P39749 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Fen1P39749 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Fen1P39749 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Fen1P39749 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Fen1P39749 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.54□□□□□ -0.56
Fen1P39749 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.54□□□□□ -0.56
Fen1P39749 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.54□□□□□ -0.56
Fen1P39749 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.54□□□□□ -0.56
Fen1P39749 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Fen1P39749 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.54□□□□□ -0.56
Fen1P39749 Mospd4-201ENSMUST00000180618 576 ntBASIC11.54□□□□□ -0.56
Fen1P39749 Gm38341-201ENSMUST00000195357 515 ntBASIC11.54□□□□□ -0.56
Fen1P39749 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.54□□□□□ -0.56
Fen1P39749 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.54□□□□□ -0.56
Fen1P39749 Cts7-204ENSMUST00000225321 1257 ntBASIC11.54□□□□□ -0.56
Fen1P39749 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Fen1P39749 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Fen1P39749 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.54□□□□□ -0.56
Fen1P39749 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Fen1P39749 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.54□□□□□ -0.56
Fen1P39749 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Fen1P39749 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Fen1P39749 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Fen1P39749 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.54□□□□□ -0.56
Fen1P39749 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Fen1P39749 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Fen1P39749 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fen1P39749 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fen1P39749 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.53□□□□□ -0.56
Fen1P39749 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.53□□□□□ -0.56
Fen1P39749 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.53□□□□□ -0.56
Fen1P39749 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Fen1P39749 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Fen1P39749 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.53□□□□□ -0.56
Fen1P39749 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fen1P39749 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fen1P39749 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.53□□□□□ -0.56
Fen1P39749 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Fen1P39749 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Fen1P39749 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Fen1P39749 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Fen1P39749 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Fen1P39749 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Fen1P39749 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Fen1P39749 Gm25214-201ENSMUST00000104573 129 ntBASIC11.53□□□□□ -0.56
Fen1P39749 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fen1P39749 Gm15370-201ENSMUST00000117158 253 ntBASIC11.53□□□□□ -0.56
Fen1P39749 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Fen1P39749 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.53□□□□□ -0.56
Fen1P39749 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Fen1P39749 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Fen1P39749 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Fen1P39749 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.53□□□□□ -0.56
Fen1P39749 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Fen1P39749 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.53□□□□□ -0.56
Fen1P39749 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Fen1P39749 Gm38158-201ENSMUST00000194617 339 ntBASIC11.53□□□□□ -0.56
Fen1P39749 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fen1P39749 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Fen1P39749 Gm807-202ENSMUST00000224929 408 ntBASIC11.53□□□□□ -0.56
Fen1P39749 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Fen1P39749 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms