Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm23916-201ENSMUST00000158484 399 ntBASIC14.83□□□□□ -0.04
Col18a1P39061 Gm22616-201ENSMUST00000179783 100 ntBASIC14.83□□□□□ -0.04
Col18a1P39061 Gm7255-201ENSMUST00000187371 908 ntBASIC14.83□□□□□ -0.04
Col18a1P39061 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC14.83□□□□□ -0.04
Col18a1P39061 Gm8960-201ENSMUST00000219787 788 ntBASIC14.83□□□□□ -0.04
Col18a1P39061 Gm5191-201ENSMUST00000222882 1236 ntBASIC14.83□□□□□ -0.04
Col18a1P39061 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col18a1P39061 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col18a1P39061 Gm38034-201ENSMUST00000193915 2069 ntBASIC14.83□□□□□ -0.04
Col18a1P39061 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col18a1P39061 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Col18a1P39061 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col18a1P39061 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col18a1P39061 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col18a1P39061 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Col18a1P39061 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col18a1P39061 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col18a1P39061 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col18a1P39061 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col18a1P39061 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.82□□□□□ -0.04
Col18a1P39061 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col18a1P39061 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col18a1P39061 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col18a1P39061 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC14.82□□□□□ -0.04
Col18a1P39061 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col18a1P39061 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.82□□□□□ -0.04
Col18a1P39061 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col18a1P39061 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col18a1P39061 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col18a1P39061 Gm13002-201ENSMUST00000119286 682 ntBASIC14.82□□□□□ -0.04
Col18a1P39061 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Col18a1P39061 Tspy-ps-203ENSMUST00000186546 989 ntBASIC14.82□□□□□ -0.04
Col18a1P39061 Gm28179-201ENSMUST00000188365 613 ntBASIC14.82□□□□□ -0.04
Col18a1P39061 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Col18a1P39061 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC14.82□□□□□ -0.04
Col18a1P39061 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC14.82□□□□□ -0.04
Col18a1P39061 AC124772.3-201ENSMUST00000222535 575 ntBASIC14.82□□□□□ -0.04
Col18a1P39061 AC165092.1-201ENSMUST00000224018 486 ntBASIC14.82□□□□□ -0.04
Col18a1P39061 AC163646.3-201ENSMUST00000228879 772 ntBASIC14.82□□□□□ -0.04
Col18a1P39061 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col18a1P39061 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col18a1P39061 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col18a1P39061 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col18a1P39061 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col18a1P39061 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col18a1P39061 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col18a1P39061 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Col18a1P39061 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col18a1P39061 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col18a1P39061 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col18a1P39061 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col18a1P39061 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col18a1P39061 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col18a1P39061 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col18a1P39061 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col18a1P39061 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col18a1P39061 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col18a1P39061 Gm8754-201ENSMUST00000118391 520 ntBASIC14.81□□□□□ -0.04
Col18a1P39061 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC14.81□□□□□ -0.04
Col18a1P39061 Gm44460-201ENSMUST00000196179 129 ntBASIC14.81□□□□□ -0.04
Col18a1P39061 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col18a1P39061 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col18a1P39061 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Col18a1P39061 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col18a1P39061 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col18a1P39061 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col18a1P39061 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col18a1P39061 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col18a1P39061 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col18a1P39061 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col18a1P39061 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col18a1P39061 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col18a1P39061 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Col18a1P39061 Gm45663-201ENSMUST00000210429 1632 ntBASIC14.81□□□□□ -0.04
Col18a1P39061 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Col18a1P39061 Gm13215-201ENSMUST00000117559 472 ntBASIC14.8□□□□□ -0.04
Col18a1P39061 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC14.8□□□□□ -0.04
Col18a1P39061 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col18a1P39061 B130024G19Rik-204ENSMUST00000191084 634 ntTSL 5 BASIC14.8□□□□□ -0.04
Col18a1P39061 AC151971.6-201ENSMUST00000216193 866 ntBASIC14.8□□□□□ -0.04
Col18a1P39061 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC14.8□□□□□ -0.04
Col18a1P39061 Gm7727-201ENSMUST00000219830 671 ntBASIC14.8□□□□□ -0.04
Col18a1P39061 Cacna2d3-208ENSMUST00000225985 918 ntBASIC14.8□□□□□ -0.04
Col18a1P39061 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col18a1P39061 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Col18a1P39061 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col18a1P39061 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col18a1P39061 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Col18a1P39061 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.8□□□□□ -0.04
Col18a1P39061 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col18a1P39061 Gm7061-201ENSMUST00000118127 1416 ntBASIC14.8□□□□□ -0.04
Col18a1P39061 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col18a1P39061 Gm42833-201ENSMUST00000196019 2124 ntBASIC14.8□□□□□ -0.04
Col18a1P39061 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col18a1P39061 Gm28453-201ENSMUST00000185556 1323 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col18a1P39061 Gm11544-201ENSMUST00000120215 382 ntBASIC14.8□□□□□ -0.04
Col18a1P39061 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col18a1P39061 Gm3355-201ENSMUST00000160079 487 ntBASIC14.8□□□□□ -0.04
Col18a1P39061 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC14.8□□□□□ -0.04
Col18a1P39061 Gm5244-201ENSMUST00000164001 339 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms