Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.52□□□□□ -0.41
Sox5P35710 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox5P35710 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.52□□□□□ -0.41
Sox5P35710 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Sox5P35710 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox5P35710 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Sox5P35710 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox5P35710 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Sox5P35710 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.52□□□□□ -0.41
Sox5P35710 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sox5P35710 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.52□□□□□ -0.41
Sox5P35710 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sox5P35710 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.52□□□□□ -0.41
Sox5P35710 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox5P35710 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.51□□□□□ -0.41
Sox5P35710 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.51□□□□□ -0.41
Sox5P35710 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC12.51□□□□□ -0.41
Sox5P35710 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Sox5P35710 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.51□□□□□ -0.41
Sox5P35710 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.51□□□□□ -0.41
Sox5P35710 Gm11783-201ENSMUST00000119549 885 ntBASIC12.51□□□□□ -0.41
Sox5P35710 Gm7150-201ENSMUST00000122032 981 ntBASIC12.51□□□□□ -0.41
Sox5P35710 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.51□□□□□ -0.41
Sox5P35710 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.51□□□□□ -0.41
Sox5P35710 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 AY036118-201ENSMUST00000200021 923 ntBASIC12.51□□□□□ -0.41
Sox5P35710 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.51□□□□□ -0.41
Sox5P35710 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.51□□□□□ -0.41
Sox5P35710 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Gm17812-201ENSMUST00000204935 318 ntBASIC12.51□□□□□ -0.41
Sox5P35710 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Gm13097-201ENSMUST00000210722 397 ntBASIC12.51□□□□□ -0.41
Sox5P35710 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.51□□□□□ -0.41
Sox5P35710 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.51□□□□□ -0.41
Sox5P35710 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox5P35710 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Sox5P35710 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox5P35710 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox5P35710 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox5P35710 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox5P35710 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC12.5□□□□□ -0.41
Sox5P35710 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sox5P35710 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox5P35710 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox5P35710 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox5P35710 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Sox5P35710 Gm24255-201ENSMUST00000104481 128 ntBASIC12.5□□□□□ -0.41
Sox5P35710 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox5P35710 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Sox5P35710 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox5P35710 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox5P35710 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.5□□□□□ -0.41
Sox5P35710 Gm15276-201ENSMUST00000145953 498 ntBASIC12.5□□□□□ -0.41
Sox5P35710 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox5P35710 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Sox5P35710 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox5P35710 Gm28686-201ENSMUST00000187404 609 ntBASIC12.5□□□□□ -0.41
Sox5P35710 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.5□□□□□ -0.41
Sox5P35710 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.5□□□□□ -0.41
Sox5P35710 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox5P35710 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.5□□□□□ -0.41
Sox5P35710 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.5□□□□□ -0.41
Sox5P35710 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.5□□□□□ -0.41
Sox5P35710 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.5□□□□□ -0.41
Sox5P35710 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox5P35710 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Sox5P35710 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox5P35710 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.5□□□□□ -0.41
Sox5P35710 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox5P35710 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox5P35710 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.5□□□□□ -0.41
Sox5P35710 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox5P35710 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox5P35710 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox5P35710 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox5P35710 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox5P35710 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms