Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm16219-201ENSMUST00000120096 274 ntBASIC10.62□□□□□ -0.71
Sftpa1P35242 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC10.62□□□□□ -0.71
Sftpa1P35242 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sftpa1P35242 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.62□□□□□ -0.71
Sftpa1P35242 Gm24328-201ENSMUST00000175104 67 ntBASIC10.62□□□□□ -0.71
Sftpa1P35242 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC10.62□□□□□ -0.71
Sftpa1P35242 Gm37782-201ENSMUST00000194879 678 ntBASIC10.62□□□□□ -0.71
Sftpa1P35242 Gm43854-201ENSMUST00000200418 394 ntBASIC10.62□□□□□ -0.71
Sftpa1P35242 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sftpa1P35242 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC10.62□□□□□ -0.71
Sftpa1P35242 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sftpa1P35242 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sftpa1P35242 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.62□□□□□ -0.71
Sftpa1P35242 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.62□□□□□ -0.71
Sftpa1P35242 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sftpa1P35242 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sftpa1P35242 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sftpa1P35242 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.62□□□□□ -0.71
Sftpa1P35242 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.62□□□□□ -0.71
Sftpa1P35242 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sftpa1P35242 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sftpa1P35242 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.62□□□□□ -0.71
Sftpa1P35242 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sftpa1P35242 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Sftpa1P35242 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sftpa1P35242 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Sftpa1P35242 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sftpa1P35242 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sftpa1P35242 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Sftpa1P35242 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sftpa1P35242 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Sftpa1P35242 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.61□□□□□ -0.71
Sftpa1P35242 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Sftpa1P35242 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.61□□□□□ -0.71
Sftpa1P35242 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Sftpa1P35242 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.61□□□□□ -0.71
Sftpa1P35242 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Sftpa1P35242 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC10.61□□□□□ -0.71
Sftpa1P35242 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.61□□□□□ -0.71
Sftpa1P35242 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.61□□□□□ -0.71
Sftpa1P35242 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC10.61□□□□□ -0.71
Sftpa1P35242 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC10.61□□□□□ -0.71
Sftpa1P35242 Gm4982-201ENSMUST00000160440 1098 ntBASIC10.61□□□□□ -0.71
Sftpa1P35242 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC10.61□□□□□ -0.71
Sftpa1P35242 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.61□□□□□ -0.71
Sftpa1P35242 Mir7035-201ENSMUST00000184713 82 ntBASIC10.61□□□□□ -0.71
Sftpa1P35242 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Sftpa1P35242 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC10.61□□□□□ -0.71
Sftpa1P35242 Gm37284-201ENSMUST00000193607 539 ntBASIC10.61□□□□□ -0.71
Sftpa1P35242 Gm44323-201ENSMUST00000198689 129 ntBASIC10.61□□□□□ -0.71
Sftpa1P35242 Gm2594-201ENSMUST00000214774 742 ntBASIC10.61□□□□□ -0.71
Sftpa1P35242 AC162932.1-201ENSMUST00000219209 872 ntBASIC10.61□□□□□ -0.71
Sftpa1P35242 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Sftpa1P35242 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Sftpa1P35242 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Sftpa1P35242 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Sftpa1P35242 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Sftpa1P35242 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Sftpa1P35242 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sftpa1P35242 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.6□□□□□ -0.71
Sftpa1P35242 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sftpa1P35242 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Sftpa1P35242 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sftpa1P35242 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sftpa1P35242 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Sftpa1P35242 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sftpa1P35242 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.6□□□□□ -0.71
Sftpa1P35242 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sftpa1P35242 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sftpa1P35242 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sftpa1P35242 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sftpa1P35242 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sftpa1P35242 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sftpa1P35242 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC10.6□□□□□ -0.71
Sftpa1P35242 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.6□□□□□ -0.71
Sftpa1P35242 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms