Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm17931-201ENSMUST00000208132 634 ntBASIC9.89□□□□□ -0.83
Slc6a1P31648 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC9.89□□□□□ -0.83
Slc6a1P31648 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Slc6a1P31648 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Slc6a1P31648 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC9.89□□□□□ -0.83
Slc6a1P31648 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC9.89□□□□□ -0.83
Slc6a1P31648 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC9.89□□□□□ -0.83
Slc6a1P31648 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Slc6a1P31648 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Slc6a1P31648 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC9.88□□□□□ -0.83
Slc6a1P31648 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
Slc6a1P31648 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Slc6a1P31648 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.88□□□□□ -0.83
Slc6a1P31648 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.88□□□□□ -0.83
Slc6a1P31648 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC9.88□□□□□ -0.83
Slc6a1P31648 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Gm19040-201ENSMUST00000203280 4726 ntBASIC9.88□□□□□ -0.83
Slc6a1P31648 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC9.88□□□□□ -0.83
Slc6a1P31648 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC9.88□□□□□ -0.83
Slc6a1P31648 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.88□□□□□ -0.83
Slc6a1P31648 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Slc6a1P31648 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC9.88□□□□□ -0.83
Slc6a1P31648 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC9.88□□□□□ -0.83
Slc6a1P31648 Gm14247-201ENSMUST00000120950 237 ntBASIC9.88□□□□□ -0.83
Slc6a1P31648 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC9.88□□□□□ -0.83
Slc6a1P31648 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC9.88□□□□□ -0.83
Slc6a1P31648 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Gm6222-202ENSMUST00000182143 629 ntBASIC9.88□□□□□ -0.83
Slc6a1P31648 Gm5850-201ENSMUST00000192923 1206 ntBASIC9.88□□□□□ -0.83
Slc6a1P31648 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC9.88□□□□□ -0.83
Slc6a1P31648 Gm38341-201ENSMUST00000195357 515 ntBASIC9.88□□□□□ -0.83
Slc6a1P31648 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC9.88□□□□□ -0.83
Slc6a1P31648 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC9.88□□□□□ -0.83
Slc6a1P31648 Gm18165-201ENSMUST00000217426 928 ntBASIC9.88□□□□□ -0.83
Slc6a1P31648 AC108416.1-202ENSMUST00000228927 1201 ntBASIC9.88□□□□□ -0.83
Slc6a1P31648 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Slc6a1P31648 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Slc6a1P31648 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Slc6a1P31648 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Slc6a1P31648 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
Slc6a1P31648 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
Slc6a1P31648 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC9.88□□□□□ -0.83
Slc6a1P31648 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Slc6a1P31648 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Slc6a1P31648 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Slc6a1P31648 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Slc6a1P31648 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC9.88□□□□□ -0.83
Slc6a1P31648 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms