Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gjb1P28230 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gjb1P28230 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gjb1P28230 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gjb1P28230 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gjb1P28230 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC12.8□□□□□ -0.36
Gjb1P28230 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC12.8□□□□□ -0.36
Gjb1P28230 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Gjb1P28230 Gm8019-201ENSMUST00000119317 587 ntBASIC12.8□□□□□ -0.36
Gjb1P28230 Gm4943-201ENSMUST00000132879 424 ntBASIC12.8□□□□□ -0.36
Gjb1P28230 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC12.8□□□□□ -0.36
Gjb1P28230 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gjb1P28230 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC12.8□□□□□ -0.36
Gjb1P28230 Gm7211-201ENSMUST00000172692 1118 ntBASIC12.8□□□□□ -0.36
Gjb1P28230 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gjb1P28230 Gm7765-201ENSMUST00000182585 974 ntBASIC12.8□□□□□ -0.36
Gjb1P28230 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC12.8□□□□□ -0.36
Gjb1P28230 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gjb1P28230 Gm9369-201ENSMUST00000196009 733 ntBASIC12.8□□□□□ -0.36
Gjb1P28230 Gm42751-201ENSMUST00000198065 559 ntBASIC12.8□□□□□ -0.36
Gjb1P28230 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Gjb1P28230 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gjb1P28230 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Gjb1P28230 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Gjb1P28230 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gjb1P28230 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC12.8□□□□□ -0.36
Gjb1P28230 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gjb1P28230 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gjb1P28230 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gjb1P28230 Gm15519-201ENSMUST00000120088 1566 ntBASIC12.8□□□□□ -0.36
Gjb1P28230 Gm44106-201ENSMUST00000203153 1599 ntBASIC12.8□□□□□ -0.36
Gjb1P28230 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gjb1P28230 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.8□□□□□ -0.36
Gjb1P28230 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Gjb1P28230 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.8□□□□□ -0.36
Gjb1P28230 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gjb1P28230 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gjb1P28230 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Gjb1P28230 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Gjb1P28230 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Gjb1P28230 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gjb1P28230 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Gjb1P28230 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gjb1P28230 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gjb1P28230 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gjb1P28230 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gjb1P28230 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Gjb1P28230 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gjb1P28230 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Gjb1P28230 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gjb1P28230 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.79□□□□□ -0.36
Gjb1P28230 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.79□□□□□ -0.36
Gjb1P28230 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gjb1P28230 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gjb1P28230 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gjb1P28230 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Gjb1P28230 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Gjb1P28230 Gm15815-201ENSMUST00000120569 255 ntBASIC12.79□□□□□ -0.36
Gjb1P28230 Gm15982-201ENSMUST00000121681 554 ntBASIC12.79□□□□□ -0.36
Gjb1P28230 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.79□□□□□ -0.36
Gjb1P28230 Gm26875-201ENSMUST00000181006 950 ntBASIC12.79□□□□□ -0.36
Gjb1P28230 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gjb1P28230 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC12.79□□□□□ -0.36
Gjb1P28230 Gm43244-201ENSMUST00000196994 1285 ntBASIC12.79□□□□□ -0.36
Gjb1P28230 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.79□□□□□ -0.36
Gjb1P28230 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC12.79□□□□□ -0.36
Gjb1P28230 Gm18010-201ENSMUST00000203553 202 ntBASIC12.79□□□□□ -0.36
Gjb1P28230 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Gjb1P28230 Rps3a2-201ENSMUST00000074245 792 ntBASIC12.79□□□□□ -0.36
Gjb1P28230 Rps3a3-201ENSMUST00000074680 795 ntBASIC12.79□□□□□ -0.36
Gjb1P28230 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Gjb1P28230 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gjb1P28230 Gm10580-201ENSMUST00000097985 396 ntBASIC12.79□□□□□ -0.36
Gjb1P28230 Gm10582-201ENSMUST00000097987 396 ntBASIC12.79□□□□□ -0.36
Gjb1P28230 Gm10583-201ENSMUST00000097988 396 ntBASIC12.79□□□□□ -0.36
Gjb1P28230 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gjb1P28230 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gjb1P28230 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gjb1P28230 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Gjb1P28230 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Gjb1P28230 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.79□□□□□ -0.36
Gjb1P28230 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Gjb1P28230 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gjb1P28230 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gjb1P28230 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gjb1P28230 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gjb1P28230 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gjb1P28230 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC12.79□□□□□ -0.36
Gjb1P28230 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gjb1P28230 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.78□□□□□ -0.36
Gjb1P28230 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gjb1P28230 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gjb1P28230 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gjb1P28230 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Gjb1P28230 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gjb1P28230 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gjb1P28230 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gjb1P28230 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gjb1P28230 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gjb1P28230 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms