Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Nfkb1P25799 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.84□□□□□ -0.51
Nfkb1P25799 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nfkb1P25799 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nfkb1P25799 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.84□□□□□ -0.51
Nfkb1P25799 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.84□□□□□ -0.51
Nfkb1P25799 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nfkb1P25799 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nfkb1P25799 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nfkb1P25799 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nfkb1P25799 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.83□□□□□ -0.52
Nfkb1P25799 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nfkb1P25799 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nfkb1P25799 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.83□□□□□ -0.52
Nfkb1P25799 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.83□□□□□ -0.52
Nfkb1P25799 Gm12795-201ENSMUST00000117594 539 ntBASIC11.83□□□□□ -0.52
Nfkb1P25799 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nfkb1P25799 Gm24398-201ENSMUST00000157870 109 ntBASIC11.83□□□□□ -0.52
Nfkb1P25799 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 Gm37826-201ENSMUST00000195329 322 ntBASIC11.83□□□□□ -0.52
Nfkb1P25799 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 Gm44158-201ENSMUST00000203881 505 ntBASIC11.83□□□□□ -0.52
Nfkb1P25799 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.83□□□□□ -0.52
Nfkb1P25799 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nfkb1P25799 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.83□□□□□ -0.52
Nfkb1P25799 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.83□□□□□ -0.52
Nfkb1P25799 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.83□□□□□ -0.52
Nfkb1P25799 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.83□□□□□ -0.52
Nfkb1P25799 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nfkb1P25799 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nfkb1P25799 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nfkb1P25799 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nfkb1P25799 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Nfkb1P25799 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nfkb1P25799 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nfkb1P25799 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nfkb1P25799 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Nfkb1P25799 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.82□□□□□ -0.52
Nfkb1P25799 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nfkb1P25799 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nfkb1P25799 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nfkb1P25799 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nfkb1P25799 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nfkb1P25799 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nfkb1P25799 Gm14071-201ENSMUST00000117817 509 ntBASIC11.82□□□□□ -0.52
Nfkb1P25799 Gm15549-201ENSMUST00000121595 622 ntBASIC11.82□□□□□ -0.52
Nfkb1P25799 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nfkb1P25799 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nfkb1P25799 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Nfkb1P25799 Gm28196-201ENSMUST00000187719 640 ntBASIC11.82□□□□□ -0.52
Nfkb1P25799 Gm8531-201ENSMUST00000188319 893 ntBASIC11.82□□□□□ -0.52
Nfkb1P25799 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.82□□□□□ -0.52
Nfkb1P25799 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.82□□□□□ -0.52
Nfkb1P25799 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.82□□□□□ -0.52
Nfkb1P25799 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.82□□□□□ -0.52
Nfkb1P25799 Gm19009-201ENSMUST00000223072 823 ntBASIC11.82□□□□□ -0.52
Nfkb1P25799 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.82□□□□□ -0.52
Nfkb1P25799 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.82□□□□□ -0.52
Nfkb1P25799 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nfkb1P25799 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nfkb1P25799 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nfkb1P25799 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.82□□□□□ -0.52
Nfkb1P25799 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nfkb1P25799 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms