Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC9.57□□□□□ -0.88
Col8a2P25318 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC9.57□□□□□ -0.88
Col8a2P25318 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC9.57□□□□□ -0.88
Col8a2P25318 Gm35960-201ENSMUST00000202712 767 ntBASIC9.57□□□□□ -0.88
Col8a2P25318 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Gm6108-201ENSMUST00000208365 367 ntBASIC9.57□□□□□ -0.88
Col8a2P25318 CT485606.1-201ENSMUST00000213187 878 ntBASIC9.57□□□□□ -0.88
Col8a2P25318 AC118639.2-201ENSMUST00000226289 223 ntBASIC9.57□□□□□ -0.88
Col8a2P25318 Gm10254-201ENSMUST00000052888 867 ntBASIC9.57□□□□□ -0.88
Col8a2P25318 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Col8a2P25318 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Col8a2P25318 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC9.57□□□□□ -0.88
Col8a2P25318 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Col8a2P25318 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.56□□□□□ -0.88
Col8a2P25318 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Col8a2P25318 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC9.56□□□□□ -0.88
Col8a2P25318 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.56□□□□□ -0.88
Col8a2P25318 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC9.56□□□□□ -0.88
Col8a2P25318 Gm14314-201ENSMUST00000118225 1015 ntBASIC9.56□□□□□ -0.88
Col8a2P25318 Gm15615-201ENSMUST00000118876 198 ntBASIC9.56□□□□□ -0.88
Col8a2P25318 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC9.56□□□□□ -0.88
Col8a2P25318 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC9.56□□□□□ -0.88
Col8a2P25318 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC9.56□□□□□ -0.88
Col8a2P25318 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Col8a2P25318 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC9.56□□□□□ -0.88
Col8a2P25318 Mir7076-201ENSMUST00000183519 74 ntBASIC9.56□□□□□ -0.88
Col8a2P25318 Gm8531-201ENSMUST00000188319 893 ntBASIC9.56□□□□□ -0.88
Col8a2P25318 Gm3551-201ENSMUST00000190750 664 ntBASIC9.56□□□□□ -0.88
Col8a2P25318 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC9.56□□□□□ -0.88
Col8a2P25318 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Gm2875-201ENSMUST00000211333 360 ntBASIC9.56□□□□□ -0.88
Col8a2P25318 AC115122.1-201ENSMUST00000224850 1040 ntBASIC9.56□□□□□ -0.88
Col8a2P25318 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Mirlet7i-201ENSMUST00000083472 85 ntBASIC9.56□□□□□ -0.88
Col8a2P25318 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Col8a2P25318 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Col8a2P25318 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC9.56□□□□□ -0.88
Col8a2P25318 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.56□□□□□ -0.88
Col8a2P25318 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.56□□□□□ -0.88
Col8a2P25318 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC9.56□□□□□ -0.88
Col8a2P25318 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Col8a2P25318 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC9.55□□□□□ -0.88
Col8a2P25318 AC122811.1-201ENSMUST00000222257 2921 ntBASIC9.55□□□□□ -0.88
Col8a2P25318 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col8a2P25318 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col8a2P25318 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Col8a2P25318 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col8a2P25318 Gm43061-201ENSMUST00000198850 2241 ntBASIC9.55□□□□□ -0.88
Col8a2P25318 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Col8a2P25318 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms