Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6bP23440 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.61□□□□□ -0.39
Pde6bP23440 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.61□□□□□ -0.39
Pde6bP23440 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6bP23440 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6bP23440 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.61□□□□□ -0.39
Pde6bP23440 Gm8342-201ENSMUST00000209839 757 ntBASIC12.61□□□□□ -0.39
Pde6bP23440 Gm19009-201ENSMUST00000223072 823 ntBASIC12.61□□□□□ -0.39
Pde6bP23440 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6bP23440 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.61□□□□□ -0.39
Pde6bP23440 Gm5451-201ENSMUST00000080545 579 ntBASIC12.61□□□□□ -0.39
Pde6bP23440 Olfr584-201ENSMUST00000098210 964 ntBASIC12.61□□□□□ -0.39
Pde6bP23440 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.61□□□□□ -0.39
Pde6bP23440 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6bP23440 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6bP23440 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6bP23440 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6bP23440 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pde6bP23440 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6bP23440 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6bP23440 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6bP23440 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6bP23440 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6bP23440 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6bP23440 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6bP23440 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.6□□□□□ -0.39
Pde6bP23440 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6bP23440 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6bP23440 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pde6bP23440 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6bP23440 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6bP23440 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6bP23440 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6bP23440 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.6□□□□□ -0.39
Pde6bP23440 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6bP23440 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6bP23440 Gm12419-201ENSMUST00000116649 636 ntBASIC12.6□□□□□ -0.39
Pde6bP23440 Gm12036-201ENSMUST00000120008 530 ntBASIC12.6□□□□□ -0.39
Pde6bP23440 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.6□□□□□ -0.39
Pde6bP23440 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6bP23440 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.6□□□□□ -0.39
Pde6bP23440 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6bP23440 Gm10807-201ENSMUST00000177134 795 ntBASIC12.6□□□□□ -0.39
Pde6bP23440 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6bP23440 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6bP23440 Gm9192-201ENSMUST00000183221 985 ntBASIC12.6□□□□□ -0.39
Pde6bP23440 Gm7593-201ENSMUST00000187246 644 ntBASIC12.6□□□□□ -0.39
Pde6bP23440 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6bP23440 Gm44315-201ENSMUST00000203041 219 ntBASIC12.6□□□□□ -0.39
Pde6bP23440 Gm19091-201ENSMUST00000208120 978 ntBASIC12.6□□□□□ -0.39
Pde6bP23440 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6bP23440 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.6□□□□□ -0.39
Pde6bP23440 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6bP23440 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pde6bP23440 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.6□□□□□ -0.39
Pde6bP23440 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.6□□□□□ -0.39
Pde6bP23440 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6bP23440 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6bP23440 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6bP23440 Map1b-203ENSMUST00000223725 2669 ntBASIC12.6□□□□□ -0.39
Pde6bP23440 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6bP23440 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.6□□□□□ -0.39
Pde6bP23440 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pde6bP23440 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pde6bP23440 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
Pde6bP23440 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pde6bP23440 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.59□□□□□ -0.39
Pde6bP23440 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pde6bP23440 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6bP23440 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.59□□□□□ -0.39
Pde6bP23440 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.59□□□□□ -0.39
Pde6bP23440 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6bP23440 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6bP23440 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pde6bP23440 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6bP23440 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.59□□□□□ -0.39
Pde6bP23440 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6bP23440 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Pde6bP23440 Gm23272-201ENSMUST00000104053 129 ntBASIC12.59□□□□□ -0.39
Pde6bP23440 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6bP23440 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.59□□□□□ -0.39
Pde6bP23440 Gm8459-201ENSMUST00000162504 760 ntBASIC12.59□□□□□ -0.39
Pde6bP23440 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6bP23440 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6bP23440 Gm6114-201ENSMUST00000182472 968 ntBASIC12.59□□□□□ -0.39
Pde6bP23440 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6bP23440 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.59□□□□□ -0.39
Pde6bP23440 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.59□□□□□ -0.39
Pde6bP23440 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.59□□□□□ -0.39
Pde6bP23440 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.59□□□□□ -0.39
Pde6bP23440 Gm45594-201ENSMUST00000211717 241 ntBASIC12.59□□□□□ -0.39
Pde6bP23440 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6bP23440 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6bP23440 Gm23680-201ENSMUST00000083162 164 ntBASIC12.59□□□□□ -0.39
Pde6bP23440 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6bP23440 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6bP23440 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6bP23440 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6bP23440 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pde6bP23440 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms