Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
BdnfP21237 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
BdnfP21237 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.05□□□□□ -0.64
BdnfP21237 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.05□□□□□ -0.64
BdnfP21237 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
BdnfP21237 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.05□□□□□ -0.64
BdnfP21237 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.05□□□□□ -0.64
BdnfP21237 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.05□□□□□ -0.64
BdnfP21237 Gm5455-201ENSMUST00000058710 715 ntBASIC11.05□□□□□ -0.64
BdnfP21237 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.05□□□□□ -0.64
BdnfP21237 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
BdnfP21237 Mrps14-203ENSMUST00000135680 2999 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
BdnfP21237 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
BdnfP21237 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.05□□□□□ -0.64
BdnfP21237 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
BdnfP21237 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Gm6092-201ENSMUST00000121659 2029 ntBASIC11.04□□□□□ -0.64
BdnfP21237 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
BdnfP21237 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
BdnfP21237 Tmem260-202ENSMUST00000124720 3035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.04□□□□□ -0.64
BdnfP21237 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.04□□□□□ -0.64
BdnfP21237 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
BdnfP21237 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
BdnfP21237 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.04□□□□□ -0.64
BdnfP21237 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.04□□□□□ -0.64
BdnfP21237 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Gm38341-201ENSMUST00000195357 515 ntBASIC11.04□□□□□ -0.64
BdnfP21237 Gm45224-201ENSMUST00000208203 414 ntBASIC11.04□□□□□ -0.64
BdnfP21237 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.04□□□□□ -0.64
BdnfP21237 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
BdnfP21237 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
BdnfP21237 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
BdnfP21237 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
BdnfP21237 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BdnfP21237 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
BdnfP21237 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
BdnfP21237 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BdnfP21237 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BdnfP21237 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
BdnfP21237 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BdnfP21237 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
BdnfP21237 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BdnfP21237 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BdnfP21237 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
BdnfP21237 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BdnfP21237 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
BdnfP21237 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
BdnfP21237 Gm24255-201ENSMUST00000104481 128 ntBASIC11.03□□□□□ -0.64
BdnfP21237 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.03□□□□□ -0.64
BdnfP21237 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
BdnfP21237 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.03□□□□□ -0.64
BdnfP21237 Gm32999-201ENSMUST00000192693 562 ntBASIC11.03□□□□□ -0.64
BdnfP21237 Rprl1-202ENSMUST00000198476 238 ntBASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms