Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Kcna1P16388 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.05□□□□□ -0.32
Kcna1P16388 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.05□□□□□ -0.32
Kcna1P16388 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.05□□□□□ -0.32
Kcna1P16388 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Kcna1P16388 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC13.05□□□□□ -0.32
Kcna1P16388 Gm37826-201ENSMUST00000195329 322 ntBASIC13.05□□□□□ -0.32
Kcna1P16388 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.05□□□□□ -0.32
Kcna1P16388 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.05□□□□□ -0.32
Kcna1P16388 Gm29787-201ENSMUST00000222129 849 ntBASIC13.05□□□□□ -0.32
Kcna1P16388 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Kcna1P16388 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.05□□□□□ -0.32
Kcna1P16388 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.05□□□□□ -0.32
Kcna1P16388 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Kcna1P16388 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Kcna1P16388 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Kcna1P16388 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Kcna1P16388 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.04□□□□□ -0.32
Kcna1P16388 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Kcna1P16388 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Kcna1P16388 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.04□□□□□ -0.32
Kcna1P16388 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Kcna1P16388 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Kcna1P16388 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC13.04□□□□□ -0.32
Kcna1P16388 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Kcna1P16388 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Kcna1P16388 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Kcna1P16388 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Kcna1P16388 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Kcna1P16388 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.04□□□□□ -0.32
Kcna1P16388 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.04□□□□□ -0.32
Kcna1P16388 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Kcna1P16388 Gm14395-201ENSMUST00000120494 563 ntBASIC13.04□□□□□ -0.32
Kcna1P16388 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Kcna1P16388 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Kcna1P16388 Gm28975-201ENSMUST00000186412 686 ntBASIC13.04□□□□□ -0.32
Kcna1P16388 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Kcna1P16388 AC122891.1-201ENSMUST00000218671 268 ntBASIC13.04□□□□□ -0.32
Kcna1P16388 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Kcna1P16388 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.04□□□□□ -0.32
Kcna1P16388 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Kcna1P16388 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Kcna1P16388 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Kcna1P16388 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Kcna1P16388 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Kcna1P16388 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Kcna1P16388 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Kcna1P16388 Gm28424-201ENSMUST00000187393 1319 ntBASIC13.04□□□□□ -0.32
Kcna1P16388 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Kcna1P16388 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Kcna1P16388 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Kcna1P16388 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Kcna1P16388 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Kcna1P16388 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Kcna1P16388 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Kcna1P16388 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Kcna1P16388 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Kcna1P16388 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Kcna1P16388 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Kcna1P16388 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC13.04□□□□□ -0.32
Kcna1P16388 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.03□□□□□ -0.32
Kcna1P16388 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Kcna1P16388 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Kcna1P16388 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Kcna1P16388 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Kcna1P16388 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Kcna1P16388 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Kcna1P16388 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Kcna1P16388 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Kcna1P16388 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Kcna1P16388 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Kcna1P16388 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Kcna1P16388 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Kcna1P16388 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Kcna1P16388 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Kcna1P16388 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms