Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.09□□□□□ -0.63
Fv4P11370 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.09□□□□□ -0.63
Fv4P11370 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Gm2965-201ENSMUST00000198365 343 ntBASIC11.09□□□□□ -0.63
Fv4P11370 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.09□□□□□ -0.63
Fv4P11370 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
Fv4P11370 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
Fv4P11370 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.09□□□□□ -0.63
Fv4P11370 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Fv4P11370 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Fv4P11370 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Fv4P11370 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.09□□□□□ -0.63
Fv4P11370 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.09□□□□□ -0.63
Fv4P11370 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.09□□□□□ -0.63
Fv4P11370 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.09□□□□□ -0.63
Fv4P11370 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Fv4P11370 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.08□□□□□ -0.63
Fv4P11370 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.08□□□□□ -0.64
Fv4P11370 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.08□□□□□ -0.64
Fv4P11370 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.08□□□□□ -0.64
Fv4P11370 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Fv4P11370 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Fv4P11370 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.08□□□□□ -0.64
Fv4P11370 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Mir1938-201ENSMUST00000158746 100 ntBASIC11.08□□□□□ -0.64
Fv4P11370 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Fv4P11370 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.08□□□□□ -0.64
Fv4P11370 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.08□□□□□ -0.64
Fv4P11370 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.08□□□□□ -0.64
Fv4P11370 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.08□□□□□ -0.64
Fv4P11370 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.08□□□□□ -0.64
Fv4P11370 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.08□□□□□ -0.64
Fv4P11370 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Fv4P11370 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.08□□□□□ -0.64
Fv4P11370 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.08□□□□□ -0.64
Fv4P11370 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.08□□□□□ -0.64
Fv4P11370 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Fv4P11370 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Fv4P11370 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Fv4P11370 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fv4P11370 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Fv4P11370 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fv4P11370 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fv4P11370 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fv4P11370 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fv4P11370 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.07□□□□□ -0.64
Fv4P11370 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Fv4P11370 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Fv4P11370 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Fv4P11370 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms