Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm11700-201ENSMUST00000119409 403 ntBASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Gm11331-201ENSMUST00000119764 288 ntBASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Gm43378-201ENSMUST00000199336 582 ntBASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Chmp6P0C0A3 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Gm12165-201ENSMUST00000117047 342 ntBASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Gm13916-201ENSMUST00000117368 628 ntBASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Gm11941-201ENSMUST00000119904 610 ntBASIC12.51□□□□□ -0.41
Chmp6P0C0A3 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Gm20426-201ENSMUST00000173657 440 ntBASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Gm9555-201ENSMUST00000200908 583 ntBASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Chmp6P0C0A3 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Gm13809-201ENSMUST00000117921 597 ntBASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Gm13611-201ENSMUST00000118269 318 ntBASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Gm11783-201ENSMUST00000119549 885 ntBASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Gm15566-201ENSMUST00000121130 590 ntBASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.5□□□□□ -0.41
Chmp6P0C0A3 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms